Gene annotation
Transcriptome id Sobic.010G268300.1
Synonym Sb10g030320
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5Z1X2
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF237
NCBI CDD KOG0700; Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G51370 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os06g50380.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a018501 , Zm00025a041713
Brachypodium KQK16722 , KQK16721 , KQK16720
Barley HORVU7Hr1G117970.1
Wheat TraesCS7B02G455500 , TraesCS7D02G524700 , TraesCS7A02G537000
Populus -


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cDNA sequences
Sobic.010G268300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
2 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
3 Sobic.008G136200 spotted leaf 11, putative, expressed -
4 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
5 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
6 Sobic.004G246700 zinc finger family protein, putative, expressed -
7 Sobic.004G021200 expressed protein -
8 Sobic.007G009400 bromodomain domain containing protein, expressed -
9 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
10 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
11 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
12 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
14 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
15 Sobic.008G165700 expressed protein -
16 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
17 Sobic.001G407200 SacI homology domain containing protein, expressed -
18 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
19 Sobic.004G083700 expressed protein -
20 Sobic.001G291100 tetraspanin family protein, putative, expressed -


Gene co-expression network
sample Sobic010G268300 Sobic010G268300 Sobic001G281600 Sobic001G281600 Sobic010G268300--Sobic001G281600 Sobic002G122600 Sobic002G122600 Sobic010G268300--Sobic002G122600 Sobic008G136200 Sobic008G136200 Sobic010G268300--Sobic008G136200 Sobic003G401100 Sobic003G401100 Sobic010G268300--Sobic003G401100 Sobic009G215800 Sobic009G215800 Sobic010G268300--Sobic009G215800 Sobic004G246700 Sobic004G246700 Sobic010G268300--Sobic004G246700 Sobic004G021200 Sobic004G021200 Sobic010G268300--Sobic004G021200 Sobic007G009400 Sobic007G009400 Sobic010G268300--Sobic007G009400 Sobic010G279700 Sobic010G279700 Sobic010G268300--Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic002G122600--Sobic001G281600 Sobic002G122600--Sobic009G215800 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic004G083700 Sobic004G083700 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic003G078800 Sobic003G078800 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic002G144933 Sobic002G144933 Sobic008G136200--Sobic002G144933 Sobic007G205800 Sobic007G205800 Sobic008G136200--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G136200--Sobic007G011400 Sobic008G136200--Sobic009G215800 Sobic009G065100 Sobic009G065100 Sobic008G136200--Sobic009G065100 Sobic001G094000 Sobic001G094000 Sobic008G136200--Sobic001G094000 Sobic002G157000 Sobic002G157000 Sobic008G136200--Sobic002G157000 Sobic003G197800 Sobic003G197800 Sobic008G136200--Sobic003G197800 Sobic009G087800 Sobic009G087800 Sobic008G136200--Sobic009G087800 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic003G401100--Sobic004G084300 Sobic003G401100--Sobic001G281600 Sobic003G081000 Sobic003G081000 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic009G215800--Sobic009G065100 Sobic009G215800--Sobic004G084300 Sobic009G215800--Sobic008G136200 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic001G107500 Sobic001G107500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic008G067600 Sobic008G067600 Sobic009G215800--Sobic008G067600 Sobic004G349900 Sobic004G349900 Sobic004G246700--Sobic004G349900 Sobic002G365100 Sobic002G365100 Sobic004G246700--Sobic002G365100 Sobic002G259800 Sobic002G259800 Sobic004G246700--Sobic002G259800 Sobic008G127400 Sobic008G127400 Sobic004G246700--Sobic008G127400 Sobic004G246700--Sobic003G241200 Sobic010G202600 Sobic010G202600 Sobic004G246700--Sobic010G202600 Sobic004G096500 Sobic004G096500 Sobic004G246700--Sobic004G096500 Sobic002G320500 Sobic002G320500 Sobic004G246700--Sobic002G320500 Sobic002G034600 Sobic002G034600 Sobic004G246700--Sobic002G034600 Sobic003G266001 Sobic003G266001 Sobic004G021200--Sobic003G266001 Sobic008G103200 Sobic008G103200 Sobic004G021200--Sobic008G103200 Sobic004G021200--Sobic010G279700 Sobic004G021200--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic004G021200--Sobic008G083000 Sobic006G273200 Sobic006G273200 Sobic004G021200--Sobic006G273200 Sobic005G106500 Sobic005G106500 Sobic004G021200--Sobic005G106500 Sobic007G096000 Sobic007G096000 Sobic004G021200--Sobic007G096000 Sobic002G310200 Sobic002G310200 Sobic004G021200--Sobic002G310200 Sobic007G009400--Sobic003G241200 Sobic007G009400--Sobic003G401100 Sobic004G205600 Sobic004G205600 Sobic007G009400--Sobic004G205600 Sobic010G101800 Sobic010G101800 Sobic007G009400--Sobic010G101800 Sobic007G104800 Sobic007G104800 Sobic007G009400--Sobic007G104800 Sobic004G325400 Sobic004G325400 Sobic007G009400--Sobic004G325400 Sobic002G388200 Sobic002G388200 Sobic007G009400--Sobic002G388200 Sobic001G409600 Sobic001G409600 Sobic007G009400--Sobic001G409600 Sobic007G009400--Sobic003G081000 Sobic010G279700--Sobic001G281600 Sobic010G279700--Sobic008G083000 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic010G279700--Sobic004G021200
Octagon: transcription factors


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