Gene annotation
Transcriptome id Sobic.008G165700.1
Synonym Sb08g021160
Functional annotation expressed protein
UniProt C5YRV9
Pfam -
Panther DB PTHR33065 PTHR33065:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g39000.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G165700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
2 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
3 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
4 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
5 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
6 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -
7 Sobic.003G123000 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
8 Sobic.003G018900 bromodomain containing protein, expressed K11684: bromodomain-containing factor 1
9 Sobic.003G000150 - -
10 Sobic.006G171700 - -
11 Sobic.007G009400 bromodomain domain containing protein, expressed -
12 Sobic.004G246700 zinc finger family protein, putative, expressed -
13 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
14 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
15 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
16 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
17 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
18 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
19 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
20 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126


Gene co-expression network
sample Sobic008G165700 Sobic008G165700 Sobic006G273200 Sobic006G273200 Sobic008G165700--Sobic006G273200 Sobic009G233300 Sobic009G233300 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic002G187801 Sobic002G187801 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic003G176600 Sobic003G176600 Sobic006G273200--Sobic003G176600 Sobic009G233300--Sobic006G273200 Sobic009G233300--Sobic008G165700 Sobic009G233300--Sobic002G187801 Sobic006G119800 Sobic006G119800 Sobic009G233300--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic001G284800 Sobic001G284800 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic009G233300--Sobic003G176600 Sobic001G281600 Sobic001G281600 Sobic010G268300--Sobic001G281600 Sobic002G122600 Sobic002G122600 Sobic010G268300--Sobic002G122600 Sobic008G136200 Sobic008G136200 Sobic010G268300--Sobic008G136200 Sobic003G401100 Sobic003G401100 Sobic010G268300--Sobic003G401100 Sobic009G215800 Sobic009G215800 Sobic010G268300--Sobic009G215800 Sobic004G246700 Sobic004G246700 Sobic010G268300--Sobic004G246700 Sobic004G021200 Sobic004G021200 Sobic010G268300--Sobic004G021200 Sobic007G009400 Sobic007G009400 Sobic010G268300--Sobic007G009400 Sobic010G279700 Sobic010G279700 Sobic010G268300--Sobic010G279700 Sobic002G187801--Sobic008G165700 Sobic001G253700 Sobic001G253700 Sobic002G187801--Sobic001G253700 Sobic002G187801--Sobic009G233300 Sobic002G187801--Sobic006G273200 Sobic002G187801--Sobic001G284800 Sobic004G003501 Sobic004G003501 Sobic002G187801--Sobic004G003501 Sobic002G187801--Sobic003G000150 Sobic002G092300 Sobic002G092300 Sobic002G187801--Sobic002G092300 Sobic002G187801--Sobic002G365100 Sobic003G185200 Sobic003G185200 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic002G365100--Sobic004G246700 Sobic010G055500 Sobic010G055500 Sobic002G365100--Sobic010G055500 Sobic010G174800 Sobic010G174800 Sobic002G365100--Sobic010G174800 Sobic001G028400 Sobic001G028400 Sobic002G365100--Sobic001G028400 Sobic006G128800 Sobic006G128800 Sobic002G365100--Sobic006G128800 Sobic004G096500 Sobic004G096500 Sobic001G191100--Sobic004G096500 Sobic001G191100--Sobic004G246700 Sobic010G143200 Sobic010G143200 Sobic001G191100--Sobic010G143200 Sobic001G191100--Sobic008G165700 Sobic009G178800 Sobic009G178800 Sobic001G191100--Sobic009G178800 Sobic010G000700 Sobic010G000700 Sobic001G191100--Sobic010G000700 Sobic009G198900 Sobic009G198900 Sobic001G191100--Sobic009G198900 Sobic010G280100 Sobic010G280100 Sobic001G191100--Sobic010G280100 Sobic004G211400 Sobic004G211400 Sobic001G191100--Sobic004G211400 Sobic003G122500 Sobic003G122500 Sobic003G123000--Sobic003G122500 Sobic004G095300 Sobic004G095300 Sobic003G123000--Sobic004G095300 Sobic001G222900 Sobic001G222900 Sobic003G123000--Sobic001G222900 Sobic010G171100 Sobic010G171100 Sobic003G123000--Sobic010G171100 Sobic002G280600 Sobic002G280600 Sobic003G123000--Sobic002G280600 Sobic003G123000--Sobic004G246700 Sobic001G218800 Sobic001G218800 Sobic003G123000--Sobic001G218800 Sobic003G123000--Sobic008G165700 Sobic001G473600 Sobic001G473600 Sobic003G123000--Sobic001G473600 Sobic003G018900--Sobic006G273200 Sobic003G018900--Sobic004G021200 Sobic009G157200 Sobic009G157200 Sobic003G018900--Sobic009G157200 Sobic003G018900--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic003G018900--Sobic007G078500 Sobic003G018900--Sobic001G281600 Sobic007G115200 Sobic007G115200 Sobic003G018900--Sobic007G115200 Sobic004G087600 Sobic004G087600 Sobic003G018900--Sobic004G087600 Sobic003G250500 Sobic003G250500 Sobic003G018900--Sobic003G250500 Sobic003G000150--Sobic002G187801 Sobic003G000150--Sobic008G165700 Sobic003G142700 Sobic003G142700 Sobic003G000150--Sobic003G142700 Sobic001G261597 Sobic001G261597 Sobic003G000150--Sobic001G261597 Sobic003G000150--Sobic003G018900 Sobic008G139700 Sobic008G139700 Sobic003G000150--Sobic008G139700 Sobic006G171700 Sobic006G171700 Sobic003G000150--Sobic006G171700 Sobic010G090900 Sobic010G090900 Sobic003G000150--Sobic010G090900 Sobic003G000150--Sobic003G250500
Octagon: transcription factors


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