Gene annotation
Transcriptome id Sobic.002G187801.1,Sobic.002G187801.2
Synonym -
Functional annotation -
UniProt A0A1W0W513 , A0A1W0W4Z0
Pfam PF03540
Panther DB PTHR21242 PTHR21242:SF0
NCBI CDD -
KEGG Orthology K03134; transcription initiation factor TFIID subunit 10
Gene Ontology GO:0006352; DNA-templated transcription, initiation GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G31720 : TBP-associated factor II 15
RAP-DB (Rice) LOC_Os09g26180.1 : transcription initiation factor TFIID subunit 10, putative, expressed
MaizeGDB (Corn) Zm00025a047091
Brachypodium KQK20487 , KQK20486
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G165700 expressed protein -
2 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
4 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
5 Sobic.001G284800 histone H3, putative, expressed K11253: histone H3
6 Sobic.004G003501 - -
7 Sobic.003G000150 - -
8 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
10 Sobic.002G388200 LTV1, putative, expressed K14798: protein LTV1
11 Sobic.009G137800 expressed protein -
12 Sobic.004G119100 expressed protein -
13 Sobic.007G115200 hydrolase, NUDIX family, domain containing protein, expressed -
14 Sobic.002G310200 expressed protein -
15 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
16 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
17 Sobic.004G135300 - -
18 Sobic.007G009400 bromodomain domain containing protein, expressed -
19 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
20 Sobic.003G018900 bromodomain containing protein, expressed K11684: bromodomain-containing factor 1


Gene co-expression network
sample Sobic002G187801 Sobic002G187801 Sobic008G165700 Sobic008G165700 Sobic002G187801--Sobic008G165700 Sobic001G253700 Sobic001G253700 Sobic002G187801--Sobic001G253700 Sobic009G233300 Sobic009G233300 Sobic002G187801--Sobic009G233300 Sobic006G273200 Sobic006G273200 Sobic002G187801--Sobic006G273200 Sobic001G284800 Sobic001G284800 Sobic002G187801--Sobic001G284800 Sobic004G003501 Sobic004G003501 Sobic002G187801--Sobic004G003501 Sobic003G000150 Sobic003G000150 Sobic002G187801--Sobic003G000150 Sobic002G092300 Sobic002G092300 Sobic002G187801--Sobic002G092300 Sobic002G365100 Sobic002G365100 Sobic002G187801--Sobic002G365100 Sobic008G165700--Sobic006G273200 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic008G165700--Sobic002G187801 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic008G165700--Sobic003G000150 Sobic006G237400 Sobic006G237400 Sobic001G253700--Sobic006G237400 Sobic001G000200 Sobic001G000200 Sobic001G253700--Sobic001G000200 Sobic001G253700--Sobic006G273200 Sobic003G176600 Sobic003G176600 Sobic001G253700--Sobic003G176600 Sobic003G001000 Sobic003G001000 Sobic001G253700--Sobic003G001000 Sobic004G119100 Sobic004G119100 Sobic001G253700--Sobic004G119100 Sobic009G249200 Sobic009G249200 Sobic001G253700--Sobic009G249200 Sobic001G253700--Sobic002G187801 Sobic007G190333 Sobic007G190333 Sobic001G253700--Sobic007G190333 Sobic009G233300--Sobic006G273200 Sobic009G233300--Sobic008G165700 Sobic009G233300--Sobic002G187801 Sobic006G119800 Sobic006G119800 Sobic009G233300--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic009G233300--Sobic003G176600 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic006G273200--Sobic003G176600 Sobic009G161600 Sobic009G161600 Sobic001G284800--Sobic009G161600 Sobic001G284800--Sobic002G187801 Sobic001G133466 Sobic001G133466 Sobic001G284800--Sobic001G133466 Sobic003G088700 Sobic003G088700 Sobic001G284800--Sobic003G088700 Sobic004G135300 Sobic004G135300 Sobic001G284800--Sobic004G135300 Sobic001G284800--Sobic009G233300 Sobic001G111900 Sobic001G111900 Sobic001G284800--Sobic001G111900 Sobic001G504000 Sobic001G504000 Sobic001G284800--Sobic001G504000 Sobic001G284800--Sobic006G273200 Sobic004G003401 Sobic004G003401 Sobic004G003501--Sobic004G003401 Sobic001G127000 Sobic001G127000 Sobic004G003501--Sobic001G127000 Sobic004G067700 Sobic004G067700 Sobic004G003501--Sobic004G067700 Sobic004G003501--Sobic002G187801 Sobic010G005700 Sobic010G005700 Sobic004G003501--Sobic010G005700 Sobic001G114000 Sobic001G114000 Sobic004G003501--Sobic001G114000 Sobic006G194500 Sobic006G194500 Sobic004G003501--Sobic006G194500 Sobic009G041700 Sobic009G041700 Sobic004G003501--Sobic009G041700 Sobic004G003501--Sobic001G284800 Sobic003G000150--Sobic002G187801 Sobic003G000150--Sobic008G165700 Sobic003G142700 Sobic003G142700 Sobic003G000150--Sobic003G142700 Sobic001G261597 Sobic001G261597 Sobic003G000150--Sobic001G261597 Sobic003G000150--Sobic003G018900 Sobic008G139700 Sobic008G139700 Sobic003G000150--Sobic008G139700 Sobic006G171700 Sobic006G171700 Sobic003G000150--Sobic006G171700 Sobic010G090900 Sobic010G090900 Sobic003G000150--Sobic010G090900 Sobic003G250500 Sobic003G250500 Sobic003G000150--Sobic003G250500 Sobic010G279700 Sobic010G279700 Sobic002G092300--Sobic010G279700 Sobic004G250300 Sobic004G250300 Sobic002G092300--Sobic004G250300 Sobic004G021200 Sobic004G021200 Sobic002G092300--Sobic004G021200 Sobic007G115200 Sobic007G115200 Sobic002G092300--Sobic007G115200 Sobic008G092300 Sobic008G092300 Sobic002G092300--Sobic008G092300 Sobic001G281600 Sobic001G281600 Sobic002G092300--Sobic001G281600 Sobic002G092300--Sobic001G000200 Sobic002G092300--Sobic003G250500 Sobic001G016000 Sobic001G016000 Sobic002G092300--Sobic001G016000 Sobic003G185200 Sobic003G185200 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic010G055500 Sobic010G055500 Sobic002G365100--Sobic010G055500 Sobic010G174800 Sobic010G174800 Sobic002G365100--Sobic010G174800 Sobic001G028400 Sobic001G028400 Sobic002G365100--Sobic001G028400 Sobic006G128800 Sobic006G128800 Sobic002G365100--Sobic006G128800
Octagon: transcription factors


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