Gene annotation
Transcriptome id Sobic.003G051200.1
Synonym Sb03g004460
Functional annotation Complex I intermediate-associated protein 30 domain containing protein, putative, expressed
UniProt C5XNF5
Pfam PF08547
Panther DB PTHR13194
NCBI CDD -
KEGG Orthology K18159; NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17350 : NADH:ubiquinone oxidoreductase intermediate-associated protein 30
RAP-DB (Rice) LOC_Os01g52720.1 : Complex I intermediate-associated protein 30 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039006
Brachypodium KQK09555 , KQK09556
Barley HORVU3Hr1G069000.1 , HORVU3Hr1G069000.2 , HORVU3Hr1G069000.3 , HORVU3Hr1G069000.4
Wheat -
Populus -


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cDNA sequences
Sobic.003G051200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
3 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
4 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
5 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
6 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
7 Sobic.002G388200 LTV1, putative, expressed K14798: protein LTV1
8 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
9 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
10 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
11 Sobic.004G007300 expressed protein -
12 Sobic.003G187200 phox domain-containing protein, putative, expressed -
13 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
14 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
15 Sobic.008G129100 expressed protein -
16 Sobic.006G267300 expressed protein -
17 Sobic.004G345700 TBC domain containing protein, expressed -
18 Sobic.003G142700 expressed protein -
19 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
20 Sobic.007G077400 dehydrogenase, putative, expressed K07512: MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase


Gene co-expression network
sample Sobic003G051200 Sobic003G051200 Sobic003G248500 Sobic003G248500 Sobic003G051200--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G051200--Sobic004G283000 Sobic001G390500 Sobic001G390500 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic002G365100 Sobic002G365100 Sobic003G051200--Sobic002G365100 Sobic002G388200 Sobic002G388200 Sobic003G051200--Sobic002G388200 Sobic001G083600 Sobic001G083600 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200 Sobic003G359300 Sobic003G359300 Sobic003G248500--Sobic003G359300 Sobic003G248500--Sobic004G283000 Sobic010G174800 Sobic010G174800 Sobic003G248500--Sobic010G174800 Sobic003G248500--Sobic001G390500 Sobic002G197100 Sobic002G197100 Sobic003G248500--Sobic002G197100 Sobic003G185200 Sobic003G185200 Sobic003G248500--Sobic003G185200 Sobic003G248500--Sobic002G365100 Sobic003G248500--Sobic003G051200 Sobic006G128800 Sobic006G128800 Sobic003G248500--Sobic006G128800 Sobic004G283000--Sobic003G248500 Sobic004G283000--Sobic002G388200 Sobic004G007300 Sobic004G007300 Sobic004G283000--Sobic004G007300 Sobic004G350100 Sobic004G350100 Sobic004G283000--Sobic004G350100 Sobic008G174300 Sobic008G174300 Sobic004G283000--Sobic008G174300 Sobic007G118200 Sobic007G118200 Sobic004G283000--Sobic007G118200 Sobic009G257800 Sobic009G257800 Sobic004G283000--Sobic009G257800 Sobic006G173100 Sobic006G173100 Sobic004G283000--Sobic006G173100 Sobic002G157300 Sobic002G157300 Sobic004G283000--Sobic002G157300 Sobic001G390500--Sobic001G083600 Sobic001G390500--Sobic003G248500 Sobic010G055500 Sobic010G055500 Sobic001G390500--Sobic010G055500 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic003G189900 Sobic003G189900 Sobic001G390500--Sobic003G189900 Sobic001G390500--Sobic010G174800 Sobic010G071200 Sobic010G071200 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic006G278700 Sobic006G278700 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G378200--Sobic002G084300 Sobic002G378200--Sobic004G007300 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic001G028400 Sobic001G028400 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic010G202600 Sobic010G202600 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic006G267300 Sobic006G267300 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic007G111100--Sobic001G390500 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic002G365100--Sobic003G248500 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic002G365100--Sobic010G055500 Sobic002G365100--Sobic010G174800 Sobic002G365100--Sobic001G028400 Sobic002G365100--Sobic006G128800 Sobic002G388200--Sobic004G283000 Sobic009G056800 Sobic009G056800 Sobic002G388200--Sobic009G056800 Sobic002G388200--Sobic006G173100 Sobic003G187400 Sobic003G187400 Sobic002G388200--Sobic003G187400 Sobic001G466700 Sobic001G466700 Sobic002G388200--Sobic001G466700 Sobic002G388200--Sobic007G118200 Sobic002G388200--Sobic008G174300 Sobic008G129100 Sobic008G129100 Sobic002G388200--Sobic008G129100 Sobic003G081000 Sobic003G081000 Sobic002G388200--Sobic003G081000 Sobic001G083600--Sobic001G390500 Sobic001G083600--Sobic010G071200 Sobic001G083600--Sobic004G263900 Sobic001G512900 Sobic001G512900 Sobic001G083600--Sobic001G512900 Sobic001G083600--Sobic010G055500 Sobic001G083600--Sobic008G174300 Sobic001G083600--Sobic002G084300 Sobic001G083600--Sobic001G056200 Sobic010G211300 Sobic010G211300 Sobic001G083600--Sobic010G211300 Sobic001G371200--Sobic007G118200 Sobic002G313500 Sobic002G313500 Sobic001G371200--Sobic002G313500 Sobic001G371200--Sobic001G466700 Sobic006G252700 Sobic006G252700 Sobic001G371200--Sobic006G252700 Sobic001G371200--Sobic006G278700 Sobic001G371200--Sobic002G378200 Sobic007G200600 Sobic007G200600 Sobic001G371200--Sobic007G200600 Sobic001G371200--Sobic003G081000 Sobic001G371200--Sobic004G283000
Octagon: transcription factors


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