Gene annotation
Transcriptome id Sobic.001G083600.1
Synonym Sb01g007540
Functional annotation 26S proteasome non-ATPase regulatory subunit 10, putative, expressed
UniProt C5X070
Pfam PF12796
Panther DB PTHR24198
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology K06694; 26S proteasome non-ATPase regulatory subunit 10
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03430 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os03g55110.1 : 26S proteasome non-ATPase regulatory subunit 10, putative, expressed
MaizeGDB (Corn) Zm00025a016768
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G083600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
2 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
3 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
4 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
5 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
6 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
7 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
8 Sobic.001G056200 expressed protein -
9 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
10 Sobic.009G198100 expressed protein -
11 Sobic.001G131800 expressed protein K15186: ELL-associated factor
12 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
13 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
14 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
15 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.009G178600 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
18 Sobic.002G346900 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
19 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
20 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1


Gene co-expression network
sample Sobic001G083600 Sobic001G083600 Sobic001G390500 Sobic001G390500 Sobic001G083600--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G083600--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic001G083600--Sobic004G263900 Sobic001G512900 Sobic001G512900 Sobic001G083600--Sobic001G512900 Sobic010G055500 Sobic010G055500 Sobic001G083600--Sobic010G055500 Sobic008G174300 Sobic008G174300 Sobic001G083600--Sobic008G174300 Sobic002G084300 Sobic002G084300 Sobic001G083600--Sobic002G084300 Sobic001G056200 Sobic001G056200 Sobic001G083600--Sobic001G056200 Sobic010G211300 Sobic010G211300 Sobic001G083600--Sobic010G211300 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic001G390500--Sobic010G055500 Sobic007G111100 Sobic007G111100 Sobic001G390500--Sobic007G111100 Sobic001G390500--Sobic004G263900 Sobic003G189900 Sobic003G189900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic001G390500--Sobic010G071200 Sobic001G390500--Sobic002G084300 Sobic010G071200--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic010G071200--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic008G142700 Sobic008G142700 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic010G071200--Sobic001G083600 Sobic004G263900--Sobic010G055500 Sobic004G263900--Sobic010G071200 Sobic004G263900--Sobic001G056200 Sobic003G359300 Sobic003G359300 Sobic004G263900--Sobic003G359300 Sobic004G263900--Sobic008G174300 Sobic007G063200 Sobic007G063200 Sobic004G263900--Sobic007G063200 Sobic010G260500 Sobic010G260500 Sobic004G263900--Sobic010G260500 Sobic001G028400 Sobic001G028400 Sobic004G263900--Sobic001G028400 Sobic004G263900--Sobic002G084300 Sobic001G512900--Sobic010G071200 Sobic001G512900--Sobic010G055500 Sobic001G512900--Sobic008G142700 Sobic001G512900--Sobic008G174300 Sobic001G512900--Sobic001G083600 Sobic001G512900--Sobic001G390500 Sobic001G512900--Sobic001G149700 Sobic003G127400 Sobic003G127400 Sobic001G512900--Sobic003G127400 Sobic009G246950 Sobic009G246950 Sobic001G512900--Sobic009G246950 Sobic010G055500--Sobic010G071200 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic001G131800 Sobic001G131800 Sobic008G174300--Sobic001G131800 Sobic008G174300--Sobic010G260500 Sobic010G033400 Sobic010G033400 Sobic008G174300--Sobic010G033400 Sobic003G081000 Sobic003G081000 Sobic008G174300--Sobic003G081000 Sobic007G118200 Sobic007G118200 Sobic008G174300--Sobic007G118200 Sobic008G174300--Sobic004G263900 Sobic009G198100 Sobic009G198100 Sobic008G174300--Sobic009G198100 Sobic003G355000 Sobic003G355000 Sobic008G174300--Sobic003G355000 Sobic008G174300--Sobic003G359300 Sobic002G084300--Sobic001G056200 Sobic002G084300--Sobic004G263900 Sobic002G084300--Sobic008G174300 Sobic002G378200 Sobic002G378200 Sobic002G084300--Sobic002G378200 Sobic002G084300--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic002G084300--Sobic001G408700 Sobic002G084300--Sobic001G390500 Sobic002G084300--Sobic003G081000 Sobic002G084300--Sobic009G198100 Sobic001G056200--Sobic002G084300 Sobic001G056200--Sobic004G263900 Sobic001G056200--Sobic001G408700 Sobic004G013600 Sobic004G013600 Sobic001G056200--Sobic004G013600 Sobic001G056200--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic001G056200--Sobic003G437500 Sobic006G088100 Sobic006G088100 Sobic001G056200--Sobic006G088100 Sobic004G007300 Sobic004G007300 Sobic001G056200--Sobic004G007300 Sobic001G056200--Sobic008G174300 Sobic010G211300--Sobic001G028400 Sobic010G211300--Sobic004G013600 Sobic006G267300 Sobic006G267300 Sobic010G211300--Sobic006G267300 Sobic010G211300--Sobic001G056200 Sobic010G211300--Sobic001G083600 Sobic010G211300--Sobic010G033400 Sobic010G211300--Sobic002G084300 Sobic010G211300--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic010G211300--Sobic005G000800
Octagon: transcription factors


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