Gene annotation
Transcriptome id Sobic.007G063200.2,Sobic.007G063200.1
Synonym ATHAP5B, HAP5B, SbNF-YC10, NF-YC2, Nuclear Factor Y, Sb07g005060
Functional annotation tentative name (PubMedID : 31536532)
core histone H2A/H2B/H3/H4, putative, expressed
UniProt C5YHY9
Pfam PF00808
Panther DB PTHR10252 PTHR10252:SF37
NCBI CDD -
KEGG Orthology K08066; NFYC, nuclear transcription factor Y, gamma
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56170 : nuclear factor Y, subunit C2
RAP-DB (Rice) LOC_Os02g07450.2 : core histone H2A/H2B/H3/H4, putative, expressed
MaizeGDB (Corn) Zm00025a054768
Brachypodium KQJ95562 , PNT66867 , KQK17051 , KQJ93544
Barley HORVU6Hr1G032200.3 , HORVU6Hr1G032200.2 , HORVU6Hr1G032200.1 , HORVU6Hr1G032200.4 , HORVU7Hr1G108370.1
Wheat TraesCS6B02G185700
Populus PNT35824 , PNT27551 , PNT27550


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cDNA sequences
Sobic.007G063200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
2 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
3 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
4 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
5 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
6 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
7 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
8 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
9 Sobic.008G142700 expressed protein -
10 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
11 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
12 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
13 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
14 Sobic.009G198100 expressed protein -
15 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
16 Sobic.006G109300 protein binding protein, putative, expressed -
17 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
18 Sobic.001G056200 expressed protein -
19 Sobic.003G346000 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.003G437500 syntaxin 6, putative, expressed -


Gene co-expression network
sample Sobic007G063200 Sobic007G063200 Sobic004G263900 Sobic004G263900 Sobic007G063200--Sobic004G263900 Sobic001G028400 Sobic001G028400 Sobic007G063200--Sobic001G028400 Sobic003G359300 Sobic003G359300 Sobic007G063200--Sobic003G359300 Sobic010G033400 Sobic010G033400 Sobic007G063200--Sobic010G033400 Sobic010G071200 Sobic010G071200 Sobic007G063200--Sobic010G071200 Sobic003G026300 Sobic003G026300 Sobic007G063200--Sobic003G026300 Sobic010G055500 Sobic010G055500 Sobic007G063200--Sobic010G055500 Sobic006G257900 Sobic006G257900 Sobic007G063200--Sobic006G257900 Sobic008G142700 Sobic008G142700 Sobic007G063200--Sobic008G142700 Sobic004G263900--Sobic010G055500 Sobic004G263900--Sobic010G071200 Sobic001G056200 Sobic001G056200 Sobic004G263900--Sobic001G056200 Sobic004G263900--Sobic003G359300 Sobic008G174300 Sobic008G174300 Sobic004G263900--Sobic008G174300 Sobic004G263900--Sobic007G063200 Sobic010G260500 Sobic010G260500 Sobic004G263900--Sobic010G260500 Sobic004G263900--Sobic001G028400 Sobic002G084300 Sobic002G084300 Sobic004G263900--Sobic002G084300 Sobic001G028400--Sobic010G033400 Sobic001G028400--Sobic007G063200 Sobic001G028400--Sobic001G056200 Sobic001G028400--Sobic004G263900 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic003G437500 Sobic003G437500 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic010G211300 Sobic010G211300 Sobic001G028400--Sobic010G211300 Sobic003G359300--Sobic010G033400 Sobic003G359300--Sobic004G263900 Sobic003G248500 Sobic003G248500 Sobic003G359300--Sobic003G248500 Sobic003G359300--Sobic007G063200 Sobic003G359300--Sobic001G028400 Sobic003G359300--Sobic008G174300 Sobic003G359300--Sobic001G056200 Sobic002G365100 Sobic002G365100 Sobic003G359300--Sobic002G365100 Sobic002G058300 Sobic002G058300 Sobic003G359300--Sobic002G058300 Sobic010G033400--Sobic007G118200 Sobic010G033400--Sobic008G174300 Sobic009G198100 Sobic009G198100 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic010G033400--Sobic001G028400 Sobic010G033400--Sobic010G260500 Sobic010G033400--Sobic003G359300 Sobic003G081000 Sobic003G081000 Sobic010G033400--Sobic003G081000 Sobic001G131800 Sobic001G131800 Sobic010G033400--Sobic001G131800 Sobic010G071200--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic010G071200--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic001G512900 Sobic001G512900 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic007G008800 Sobic007G008800 Sobic003G026300--Sobic007G008800 Sobic004G188300 Sobic004G188300 Sobic003G026300--Sobic004G188300 Sobic004G088400 Sobic004G088400 Sobic003G026300--Sobic004G088400 Sobic005G167300 Sobic005G167300 Sobic003G026300--Sobic005G167300 Sobic003G026300--Sobic007G063200 Sobic001G451000 Sobic001G451000 Sobic003G026300--Sobic001G451000 Sobic005G139800 Sobic005G139800 Sobic003G026300--Sobic005G139800 Sobic002G115801 Sobic002G115801 Sobic003G026300--Sobic002G115801 Sobic005G162600 Sobic005G162600 Sobic003G026300--Sobic005G162600 Sobic010G055500--Sobic010G071200 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic006G257900--Sobic010G071200 Sobic006G257900--Sobic001G149700 Sobic006G257900--Sobic001G478300 Sobic010G154150 Sobic010G154150 Sobic006G257900--Sobic010G154150 Sobic006G257900--Sobic007G063200 Sobic006G257900--Sobic004G231400 Sobic006G257900--Sobic010G055500 Sobic006G257900--Sobic004G188300 Sobic004G164500 Sobic004G164500 Sobic006G257900--Sobic004G164500 Sobic008G142700--Sobic010G071200 Sobic008G142700--Sobic001G512900 Sobic008G142700--Sobic010G055500 Sobic008G142700--Sobic001G149700 Sobic008G142700--Sobic007G063200 Sobic003G350600 Sobic003G350600 Sobic008G142700--Sobic003G350600 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic008G142700--Sobic001G478300
Octagon: transcription factors


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