Gene annotation
Transcriptome id Sobic.003G024800.1
Synonym UCU1, DWF12, BIN2, Sb03g002380, SK21, ATSK21
Functional annotation CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5XL67
Pfam PF07714
Panther DB PTHR24057 PTHR24057:SF5
NCBI CDD -
KEGG Orthology K14502; protein brassinosteroid insensitive 2
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G06390 : GSK3/SHAGGY-like protein kinase 1
RAP-DB (Rice) LOC_Os01g10840.1 : CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a022953 , Zm00025a035872 , Zm00025a035356
Brachypodium KQK03239
Barley HORVU3Hr1G026020.9 , HORVU3Hr1G026020.8 , HORVU3Hr1G026020.7 , HORVU3Hr1G026020.6 , HORVU3Hr1G026020.5 , HORVU3Hr1G026020.4 , HORVU3Hr1G026020.3 , HORVU3Hr1G026020.2 , HORVU3Hr1G026020.1 , HORVU3Hr1G026020.16 , HORVU3Hr1G026020.15 , HORVU3Hr1G026020.14 , HORVU3Hr1G026020.13 , HORVU3Hr1G026020.12 , HORVU3Hr1G026020.11 , HORVU3Hr1G026020.10
Wheat TraesCS3A02G136500 , TraesCS3D02G137200
Populus -


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cDNA sequences
Sobic.003G024800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
2 Sobic.004G349100 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
3 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
4 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
5 Sobic.001G350501 - K11253: histone H3
6 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
7 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
8 Sobic.008G142700 expressed protein -
9 Sobic.010G228600 LSM domain containing protein, expressed -
10 Sobic.003G420700 expressed protein -
11 Sobic.001G429400 wibg, putative, expressed K14294: WIBG, partner of Y14 and mago
12 Sobic.002G272600 TBC domain containing protein, expressed -
13 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
14 Sobic.003G101300 expressed protein -
15 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
16 Sobic.010G012600 expressed protein -
17 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.001G230900 - K07910: Ras-related protein Rab-18
19 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
20 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2


Gene co-expression network
sample Sobic003G024800 Sobic003G024800 Sobic009G036900 Sobic009G036900 Sobic003G024800--Sobic009G036900 Sobic004G349100 Sobic004G349100 Sobic003G024800--Sobic004G349100 Sobic001G309100 Sobic001G309100 Sobic003G024800--Sobic001G309100 Sobic009G034400 Sobic009G034400 Sobic003G024800--Sobic009G034400 Sobic001G350501 Sobic001G350501 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic010G071200 Sobic010G071200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic010G228600 Sobic010G228600 Sobic003G024800--Sobic010G228600 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic009G036900--Sobic003G024800 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic004G349100--Sobic003G024800 Sobic004G349100--Sobic001G350501 Sobic001G179000 Sobic001G179000 Sobic004G349100--Sobic001G179000 Sobic004G349100--Sobic009G034400 Sobic004G349100--Sobic001G309100 Sobic003G101300 Sobic003G101300 Sobic004G349100--Sobic003G101300 Sobic003G437500 Sobic003G437500 Sobic004G349100--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic004G349100--Sobic005G000800 Sobic007G195400 Sobic007G195400 Sobic004G349100--Sobic007G195400 Sobic001G038100 Sobic001G038100 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic001G309100--Sobic003G437500 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic004G122000 Sobic004G122000 Sobic009G034400--Sobic004G122000 Sobic009G034400--Sobic010G071200 Sobic009G034400--Sobic010G228600 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic002G179500 Sobic002G179500 Sobic009G034400--Sobic002G179500 Sobic009G034400--Sobic001G309100 Sobic001G350501--Sobic003G024800 Sobic001G350501--Sobic004G349100 Sobic001G350501--Sobic001G309100 Sobic010G193800 Sobic010G193800 Sobic001G350501--Sobic010G193800 Sobic001G350501--Sobic008G142700 Sobic001G350501--Sobic009G034400 Sobic003G420700 Sobic003G420700 Sobic001G350501--Sobic003G420700 Sobic001G350501--Sobic009G036900 Sobic001G350501--Sobic007G063200 Sobic004G263900 Sobic004G263900 Sobic007G063200--Sobic004G263900 Sobic001G028400 Sobic001G028400 Sobic007G063200--Sobic001G028400 Sobic003G359300 Sobic003G359300 Sobic007G063200--Sobic003G359300 Sobic010G033400 Sobic010G033400 Sobic007G063200--Sobic010G033400 Sobic007G063200--Sobic010G071200 Sobic003G026300 Sobic003G026300 Sobic007G063200--Sobic003G026300 Sobic010G055500 Sobic010G055500 Sobic007G063200--Sobic010G055500 Sobic007G063200--Sobic006G257900 Sobic007G063200--Sobic008G142700 Sobic010G071200--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic010G071200--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic001G512900 Sobic001G512900 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic008G142700--Sobic010G071200 Sobic008G142700--Sobic001G512900 Sobic008G142700--Sobic010G055500 Sobic008G142700--Sobic001G149700 Sobic008G142700--Sobic007G063200 Sobic003G350600 Sobic003G350600 Sobic008G142700--Sobic003G350600 Sobic006G109300 Sobic006G109300 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic008G142700--Sobic001G478300 Sobic010G228600--Sobic009G036900 Sobic010G228600--Sobic002G068300 Sobic001G056700 Sobic001G056700 Sobic010G228600--Sobic001G056700 Sobic001G471900 Sobic001G471900 Sobic010G228600--Sobic001G471900 Sobic010G144400 Sobic010G144400 Sobic010G228600--Sobic010G144400 Sobic010G228600--Sobic010G071200 Sobic010G228600--Sobic009G034400 Sobic010G228600--Sobic001G149700 Sobic004G164500 Sobic004G164500 Sobic010G228600--Sobic004G164500
Octagon: transcription factors


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