Gene annotation
Transcriptome id Sobic.001G429400.3
Synonym PYM, Sb01g040380
Functional annotation wibg, putative, expressed
UniProt A0A1Z5SAD0
Pfam PF09282
Panther DB PTHR22959 PTHR22959:SF0
NCBI CDD KOG4325; Uncharacterized conserved protein
KEGG Orthology K14294; WIBG, partner of Y14 and mago
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11400 : partner of Y14-MAGO
RAP-DB (Rice) LOC_Os03g15560.1 : wibg, putative, expressed
MaizeGDB (Corn) Zm00025a052822 , Zm00025a001694
Brachypodium PNT77699 , PNT77700
Barley -
Wheat TraesCS4A02G087600 , TraesCS4A02G087600 , TraesCS4D02G217100 , TraesCS4D02G217100 , TraesCS4B02G216800 , TraesCS4B02G216800
Populus -


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cDNA sequences
Sobic.001G429400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072800 expressed protein -
2 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
3 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
4 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
5 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
6 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.009G140700 PHD finger protein, putative, expressed -
8 Sobic.002G272600 TBC domain containing protein, expressed -
9 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
10 Sobic.007G007900 mago nashi, putative, expressed K12877: protein mago nashi
11 Sobic.008G142700 expressed protein -
12 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
13 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
14 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
15 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
16 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
17 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
18 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
19 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
20 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7


Gene co-expression network
sample Sobic001G429400 Sobic001G429400 Sobic004G072800 Sobic004G072800 Sobic001G429400--Sobic004G072800 Sobic003G024800 Sobic003G024800 Sobic001G429400--Sobic003G024800 Sobic010G211300 Sobic010G211300 Sobic001G429400--Sobic010G211300 Sobic003G045400 Sobic003G045400 Sobic001G429400--Sobic003G045400 Sobic003G043100 Sobic003G043100 Sobic001G429400--Sobic003G043100 Sobic001G427800 Sobic001G427800 Sobic001G429400--Sobic001G427800 Sobic009G140700 Sobic009G140700 Sobic001G429400--Sobic009G140700 Sobic002G272600 Sobic002G272600 Sobic001G429400--Sobic002G272600 Sobic004G263900 Sobic004G263900 Sobic001G429400--Sobic004G263900 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic004G072800--Sobic001G429400 Sobic004G072800--Sobic003G045400 Sobic009G036900 Sobic009G036900 Sobic003G024800--Sobic009G036900 Sobic004G349100 Sobic004G349100 Sobic003G024800--Sobic004G349100 Sobic001G309100 Sobic001G309100 Sobic003G024800--Sobic001G309100 Sobic009G034400 Sobic009G034400 Sobic003G024800--Sobic009G034400 Sobic001G350501 Sobic001G350501 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic010G071200 Sobic010G071200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic010G228600 Sobic010G228600 Sobic003G024800--Sobic010G228600 Sobic001G028400 Sobic001G028400 Sobic010G211300--Sobic001G028400 Sobic004G013600 Sobic004G013600 Sobic010G211300--Sobic004G013600 Sobic006G267300 Sobic006G267300 Sobic010G211300--Sobic006G267300 Sobic001G056200 Sobic001G056200 Sobic010G211300--Sobic001G056200 Sobic001G083600 Sobic001G083600 Sobic010G211300--Sobic001G083600 Sobic010G033400 Sobic010G033400 Sobic010G211300--Sobic010G033400 Sobic002G084300 Sobic002G084300 Sobic010G211300--Sobic002G084300 Sobic003G437500 Sobic003G437500 Sobic010G211300--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic010G211300--Sobic005G000800 Sobic001G467000 Sobic001G467000 Sobic003G045400--Sobic001G467000 Sobic006G242300 Sobic006G242300 Sobic003G045400--Sobic006G242300 Sobic003G045400--Sobic010G211300 Sobic008G139700 Sobic008G139700 Sobic003G045400--Sobic008G139700 Sobic003G045400--Sobic002G313500 Sobic001G307900 Sobic001G307900 Sobic003G045400--Sobic001G307900 Sobic003G045400--Sobic004G072800 Sobic003G045400--Sobic009G140700 Sobic001G143500 Sobic001G143500 Sobic003G045400--Sobic001G143500 Sobic001G428400 Sobic001G428400 Sobic003G043100--Sobic001G428400 Sobic009G178600 Sobic009G178600 Sobic003G043100--Sobic009G178600 Sobic003G043100--Sobic006G242300 Sobic004G077000 Sobic004G077000 Sobic003G043100--Sobic004G077000 Sobic003G043100--Sobic001G429400 Sobic003G043100--Sobic001G083600 Sobic003G043100--Sobic004G072800 Sobic004G006300 Sobic004G006300 Sobic003G043100--Sobic004G006300 Sobic001G390500 Sobic001G390500 Sobic003G043100--Sobic001G390500 Sobic001G478300 Sobic001G478300 Sobic001G427800--Sobic001G478300 Sobic001G149700 Sobic001G149700 Sobic001G427800--Sobic001G149700 Sobic001G427800--Sobic010G071200 Sobic003G273100 Sobic003G273100 Sobic001G427800--Sobic003G273100 Sobic001G371300 Sobic001G371300 Sobic001G427800--Sobic001G371300 Sobic002G291300 Sobic002G291300 Sobic001G427800--Sobic002G291300 Sobic003G093900 Sobic003G093900 Sobic001G427800--Sobic003G093900 Sobic001G427800--Sobic008G142700 Sobic001G427800--Sobic003G350600 Sobic001G010600 Sobic001G010600 Sobic009G140700--Sobic001G010600 Sobic007G086500 Sobic007G086500 Sobic009G140700--Sobic007G086500 Sobic002G058300 Sobic002G058300 Sobic009G140700--Sobic002G058300 Sobic009G140700--Sobic005G000800 Sobic009G140700--Sobic003G045400 Sobic009G140700--Sobic008G139700 Sobic009G140700--Sobic010G211300 Sobic001G009800 Sobic001G009800 Sobic009G140700--Sobic001G009800 Sobic009G140700--Sobic001G309100 Sobic001G061700 Sobic001G061700 Sobic002G272600--Sobic001G061700 Sobic001G080000 Sobic001G080000 Sobic002G272600--Sobic001G080000 Sobic002G272600--Sobic001G143500 Sobic003G405700 Sobic003G405700 Sobic002G272600--Sobic003G405700 Sobic010G105600 Sobic010G105600 Sobic002G272600--Sobic010G105600 Sobic007G205000 Sobic007G205000 Sobic002G272600--Sobic007G205000 Sobic003G038600 Sobic003G038600 Sobic002G272600--Sobic003G038600 Sobic002G272600--Sobic003G350600 Sobic010G219100 Sobic010G219100 Sobic002G272600--Sobic010G219100 Sobic010G055500 Sobic010G055500 Sobic004G263900--Sobic010G055500 Sobic004G263900--Sobic010G071200 Sobic004G263900--Sobic001G056200 Sobic003G359300 Sobic003G359300 Sobic004G263900--Sobic003G359300 Sobic008G174300 Sobic008G174300 Sobic004G263900--Sobic008G174300 Sobic004G263900--Sobic007G063200 Sobic010G260500 Sobic010G260500 Sobic004G263900--Sobic010G260500 Sobic004G263900--Sobic001G028400 Sobic004G263900--Sobic002G084300
Octagon: transcription factors


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