Gene annotation
Transcriptome id Sobic.001G427800.2,Sobic.001G427800.1
Synonym Sb01g040190
Functional annotation tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5WQ58 , A0A1Z5SAB4
Pfam PF00069
Panther DB PTHR27006 PTHR27006:SF12
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G09010 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g15770.1,LOC_Os03g15770.3 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001712 , Zm00025a052800
Brachypodium KQK22443 , KQK22442 , PNT77697
Barley HORVU4Hr1G061130.4 , HORVU4Hr1G061130.9 , HORVU4Hr1G061130.8 , HORVU4Hr1G061130.7 , HORVU4Hr1G061130.6 , HORVU4Hr1G061130.5 , HORVU4Hr1G061130.3 , HORVU4Hr1G061130.2 , HORVU4Hr1G061130.1
Wheat TraesCS4A02G089700 , TraesCS4D02G215200 , TraesCS4B02G214600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
2 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
3 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
4 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
5 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
6 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
7 Sobic.003G093900 splicing factor, putative, expressed -
8 Sobic.008G142700 expressed protein -
9 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
10 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
12 Sobic.010G228600 LSM domain containing protein, expressed -
13 Sobic.004G298300 ELMO/CED-12 family protein, putative, expressed -
14 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
15 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
16 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
17 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
18 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
19 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
20 Sobic.004G349100 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1


Gene co-expression network
sample Sobic001G427800 Sobic001G427800 Sobic001G478300 Sobic001G478300 Sobic001G427800--Sobic001G478300 Sobic001G149700 Sobic001G149700 Sobic001G427800--Sobic001G149700 Sobic010G071200 Sobic010G071200 Sobic001G427800--Sobic010G071200 Sobic003G273100 Sobic003G273100 Sobic001G427800--Sobic003G273100 Sobic001G371300 Sobic001G371300 Sobic001G427800--Sobic001G371300 Sobic002G291300 Sobic002G291300 Sobic001G427800--Sobic002G291300 Sobic003G093900 Sobic003G093900 Sobic001G427800--Sobic003G093900 Sobic008G142700 Sobic008G142700 Sobic001G427800--Sobic008G142700 Sobic003G350600 Sobic003G350600 Sobic001G427800--Sobic003G350600 Sobic004G231400 Sobic004G231400 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic006G209500 Sobic006G209500 Sobic001G478300--Sobic006G209500 Sobic001G478300--Sobic001G427800 Sobic001G478300--Sobic001G149700 Sobic010G055500 Sobic010G055500 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic001G149700--Sobic010G071200 Sobic001G149700--Sobic010G055500 Sobic001G149700--Sobic004G231400 Sobic001G149700--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic001G149700--Sobic006G257900 Sobic001G149700--Sobic008G142700 Sobic001G149700--Sobic003G273100 Sobic001G076000 Sobic001G076000 Sobic001G149700--Sobic001G076000 Sobic001G512900 Sobic001G512900 Sobic001G149700--Sobic001G512900 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic010G071200--Sobic001G478300 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic003G273100--Sobic001G371300 Sobic003G273100--Sobic001G149700 Sobic003G273100--Sobic001G478300 Sobic003G273100--Sobic004G274700 Sobic003G273100--Sobic002G291300 Sobic003G273100--Sobic001G427800 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic004G079100 Sobic004G079100 Sobic003G273100--Sobic004G079100 Sobic001G371300--Sobic003G273100 Sobic001G371300--Sobic002G291300 Sobic001G371300--Sobic001G478300 Sobic001G371300--Sobic004G274700 Sobic001G371300--Sobic001G427800 Sobic001G371300--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic001G371300--Sobic010G083700 Sobic001G056700 Sobic001G056700 Sobic001G371300--Sobic001G056700 Sobic001G371300--Sobic001G149700 Sobic002G291300--Sobic001G371300 Sobic002G291300--Sobic001G056700 Sobic002G291300--Sobic003G273100 Sobic002G291300--Sobic001G427800 Sobic001G230700 Sobic001G230700 Sobic002G291300--Sobic001G230700 Sobic001G471900 Sobic001G471900 Sobic002G291300--Sobic001G471900 Sobic007G126100 Sobic007G126100 Sobic002G291300--Sobic007G126100 Sobic002G291300--Sobic001G478300 Sobic004G164500 Sobic004G164500 Sobic002G291300--Sobic004G164500 Sobic003G093900--Sobic001G427800 Sobic003G093900--Sobic001G478300 Sobic003G093900--Sobic008G142700 Sobic003G093900--Sobic001G512900 Sobic004G350100 Sobic004G350100 Sobic003G093900--Sobic004G350100 Sobic004G072800 Sobic004G072800 Sobic003G093900--Sobic004G072800 Sobic010G033400 Sobic010G033400 Sobic003G093900--Sobic010G033400 Sobic009G193400 Sobic009G193400 Sobic003G093900--Sobic009G193400 Sobic006G218700 Sobic006G218700 Sobic003G093900--Sobic006G218700 Sobic008G142700--Sobic010G071200 Sobic008G142700--Sobic001G512900 Sobic008G142700--Sobic010G055500 Sobic008G142700--Sobic001G149700 Sobic007G063200 Sobic007G063200 Sobic008G142700--Sobic007G063200 Sobic008G142700--Sobic003G350600 Sobic006G109300 Sobic006G109300 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic008G142700--Sobic001G478300 Sobic003G350600--Sobic004G072800 Sobic001G512600 Sobic001G512600 Sobic003G350600--Sobic001G512600 Sobic003G007500 Sobic003G007500 Sobic003G350600--Sobic003G007500 Sobic003G350600--Sobic008G142700 Sobic003G226500 Sobic003G226500 Sobic003G350600--Sobic003G226500 Sobic003G350600--Sobic001G427800 Sobic009G232400 Sobic009G232400 Sobic003G350600--Sobic009G232400 Sobic001G061700 Sobic001G061700 Sobic003G350600--Sobic001G061700 Sobic001G067900 Sobic001G067900 Sobic003G350600--Sobic001G067900
Octagon: transcription factors


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