Gene annotation
Transcriptome id Sobic.004G349100.1
Synonym ATBS14A, BS14A, BET11, Sb04g037580, ATBET11
Functional annotation SNARE domain containing protein, putative, expressed
UniProt A0A194YT81
Pfam -
Panther DB PTHR12791 PTHR12791:SF34
NCBI CDD KOG3385; V-SNARE
KEGG Orthology K08504; blocked early in transport 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58170 : BET1P/SFT1P-like protein 14A
RAP-DB (Rice) LOC_Os02g57510.2 : SNARE domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a022634 , Zm00025a032770
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G349100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
2 Sobic.001G350501 - K11253: histone H3
3 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
4 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
5 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
6 Sobic.003G101300 expressed protein -
7 Sobic.003G437500 syntaxin 6, putative, expressed -
8 Sobic.005G000800 FGFR1 oncogene partner, putative, expressed K16546: FGFR1 oncogene partner
9 Sobic.007G195400 FHA domain containing protein, putative, expressed -
10 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
12 Sobic.008G142700 expressed protein -
13 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
14 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
15 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
16 Sobic.009G140700 PHD finger protein, putative, expressed -
17 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
18 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
19 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
20 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G


Gene co-expression network
sample Sobic004G349100 Sobic004G349100 Sobic003G024800 Sobic003G024800 Sobic004G349100--Sobic003G024800 Sobic001G350501 Sobic001G350501 Sobic004G349100--Sobic001G350501 Sobic001G179000 Sobic001G179000 Sobic004G349100--Sobic001G179000 Sobic009G034400 Sobic009G034400 Sobic004G349100--Sobic009G034400 Sobic001G309100 Sobic001G309100 Sobic004G349100--Sobic001G309100 Sobic003G101300 Sobic003G101300 Sobic004G349100--Sobic003G101300 Sobic003G437500 Sobic003G437500 Sobic004G349100--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic004G349100--Sobic005G000800 Sobic007G195400 Sobic007G195400 Sobic004G349100--Sobic007G195400 Sobic009G036900 Sobic009G036900 Sobic003G024800--Sobic009G036900 Sobic003G024800--Sobic004G349100 Sobic003G024800--Sobic001G309100 Sobic003G024800--Sobic009G034400 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic010G071200 Sobic010G071200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic010G228600 Sobic010G228600 Sobic003G024800--Sobic010G228600 Sobic001G350501--Sobic003G024800 Sobic001G350501--Sobic004G349100 Sobic001G350501--Sobic001G309100 Sobic010G193800 Sobic010G193800 Sobic001G350501--Sobic010G193800 Sobic001G350501--Sobic008G142700 Sobic001G350501--Sobic009G034400 Sobic003G420700 Sobic003G420700 Sobic001G350501--Sobic003G420700 Sobic001G350501--Sobic009G036900 Sobic001G350501--Sobic007G063200 Sobic007G224900 Sobic007G224900 Sobic001G179000--Sobic007G224900 Sobic003G380500 Sobic003G380500 Sobic001G179000--Sobic003G380500 Sobic006G149101 Sobic006G149101 Sobic001G179000--Sobic006G149101 Sobic001G179000--Sobic007G195400 Sobic001G179000--Sobic004G349100 Sobic009G183500 Sobic009G183500 Sobic001G179000--Sobic009G183500 Sobic003G074000 Sobic003G074000 Sobic001G179000--Sobic003G074000 Sobic002G221900 Sobic002G221900 Sobic001G179000--Sobic002G221900 Sobic007G023700 Sobic007G023700 Sobic001G179000--Sobic007G023700 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic004G122000 Sobic004G122000 Sobic009G034400--Sobic004G122000 Sobic009G034400--Sobic010G071200 Sobic009G034400--Sobic010G228600 Sobic001G424500 Sobic001G424500 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic002G179500 Sobic002G179500 Sobic009G034400--Sobic002G179500 Sobic009G034400--Sobic001G309100 Sobic001G038100 Sobic001G038100 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic001G309100--Sobic003G437500 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100 Sobic003G101300--Sobic001G309100 Sobic010G211300 Sobic010G211300 Sobic003G101300--Sobic010G211300 Sobic003G101300--Sobic009G034400 Sobic001G028400 Sobic001G028400 Sobic003G101300--Sobic001G028400 Sobic003G101300--Sobic010G071200 Sobic003G101300--Sobic004G349100 Sobic003G101300--Sobic003G024800 Sobic003G101300--Sobic009G036900 Sobic003G101300--Sobic001G424500 Sobic003G437500--Sobic001G028400 Sobic001G056200 Sobic001G056200 Sobic003G437500--Sobic001G056200 Sobic006G088100 Sobic006G088100 Sobic003G437500--Sobic006G088100 Sobic003G202800 Sobic003G202800 Sobic003G437500--Sobic003G202800 Sobic006G092800 Sobic006G092800 Sobic003G437500--Sobic006G092800 Sobic004G013600 Sobic004G013600 Sobic003G437500--Sobic004G013600 Sobic007G088900 Sobic007G088900 Sobic003G437500--Sobic007G088900 Sobic004G263900 Sobic004G263900 Sobic003G437500--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic003G437500--Sobic003G359300 Sobic005G000800--Sobic010G211300 Sobic005G000800--Sobic004G013600 Sobic006G110300 Sobic006G110300 Sobic005G000800--Sobic006G110300 Sobic004G305600 Sobic004G305600 Sobic005G000800--Sobic004G305600 Sobic008G001100 Sobic008G001100 Sobic005G000800--Sobic008G001100 Sobic004G350100 Sobic004G350100 Sobic005G000800--Sobic004G350100 Sobic002G272600 Sobic002G272600 Sobic005G000800--Sobic002G272600 Sobic005G000800--Sobic001G028400 Sobic010G033400 Sobic010G033400 Sobic005G000800--Sobic010G033400 Sobic007G195400--Sobic003G359300 Sobic004G061900 Sobic004G061900 Sobic007G195400--Sobic004G061900 Sobic008G034600 Sobic008G034600 Sobic007G195400--Sobic008G034600 Sobic007G191100 Sobic007G191100 Sobic007G195400--Sobic007G191100 Sobic006G129700 Sobic006G129700 Sobic007G195400--Sobic006G129700 Sobic003G093600 Sobic003G093600 Sobic007G195400--Sobic003G093600 Sobic001G216600 Sobic001G216600 Sobic007G195400--Sobic001G216600 Sobic002G058300 Sobic002G058300 Sobic007G195400--Sobic002G058300 Sobic003G115100 Sobic003G115100 Sobic007G195400--Sobic003G115100
Octagon: transcription factors


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