Gene annotation
Transcriptome id Sobic.001G226100.1,Sobic.001G226100.2
Synonym MRPL11, Sb01g019800
Functional annotation L11 domain containing ribosomal protein, putative, expressed
UniProt A0A1B6QKE3
Pfam PF03946 PF00298
Panther DB PTHR11661 PTHR11661:SF1
NCBI CDD KOG3257; Mitochondrial/chloroplast ribosomal protein L11
KEGG Orthology K02867; RP-L11, MRPL11, large subunit ribosomal protein L11
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G35490 : mitochondrial ribosomal protein L11
RAP-DB (Rice) LOC_Os10g32870.1 : L11 domain containing ribosomal protein, putative, expressed
MaizeGDB (Corn) Zm00025a017673
Brachypodium KQJ97008
Barley HORVU4Hr1G084240.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G226100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G251100 - K03257: translation initiation factor 4A
2 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
3 Sobic.004G141700 expressed protein -
4 Sobic.009G232400 expressed protein -
5 Sobic.002G306400 zinc finger family protein, putative, expressed -
6 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
7 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
8 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
9 Sobic.001G054200 green ripe-like, putative, expressed -
10 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.007G205000 zinc finger family protein, putative, expressed -
12 Sobic.001G307900 LYR motif containing protein, putative, expressed K18167: succinate dehydrogenase assembly factor 1
13 Sobic.001G350501 - K11253: histone H3
14 Sobic.007G115900 SAM domain family protein, expressed -
15 Sobic.009G140700 PHD finger protein, putative, expressed -
16 Sobic.004G185600 expressed protein -
17 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
18 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
19 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
20 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -


Gene co-expression network
sample Sobic001G226100 Sobic001G226100 Sobic010G251100 Sobic010G251100 Sobic001G226100--Sobic010G251100 Sobic001G402300 Sobic001G402300 Sobic001G226100--Sobic001G402300 Sobic004G141700 Sobic004G141700 Sobic001G226100--Sobic004G141700 Sobic009G232400 Sobic009G232400 Sobic001G226100--Sobic009G232400 Sobic002G306400 Sobic002G306400 Sobic001G226100--Sobic002G306400 Sobic007G118000 Sobic007G118000 Sobic001G226100--Sobic007G118000 Sobic006G252100 Sobic006G252100 Sobic001G226100--Sobic006G252100 Sobic001G512600 Sobic001G512600 Sobic001G226100--Sobic001G512600 Sobic001G054200 Sobic001G054200 Sobic001G226100--Sobic001G054200 Sobic010G251100--Sobic001G226100 Sobic010G251100--Sobic001G402300 Sobic003G226500 Sobic003G226500 Sobic010G251100--Sobic003G226500 Sobic010G251100--Sobic009G232400 Sobic007G205000 Sobic007G205000 Sobic010G251100--Sobic007G205000 Sobic008G004400 Sobic008G004400 Sobic010G251100--Sobic008G004400 Sobic006G278700 Sobic006G278700 Sobic010G251100--Sobic006G278700 Sobic010G012600 Sobic010G012600 Sobic010G251100--Sobic010G012600 Sobic010G193800 Sobic010G193800 Sobic010G251100--Sobic010G193800 Sobic008G137600 Sobic008G137600 Sobic001G402300--Sobic008G137600 Sobic001G402300--Sobic001G226100 Sobic001G402300--Sobic004G141700 Sobic001G402300--Sobic010G251100 Sobic001G402300--Sobic007G118000 Sobic001G402300--Sobic009G232400 Sobic002G413400 Sobic002G413400 Sobic001G402300--Sobic002G413400 Sobic001G529000 Sobic001G529000 Sobic001G402300--Sobic001G529000 Sobic001G285300 Sobic001G285300 Sobic001G402300--Sobic001G285300 Sobic004G141700--Sobic009G232400 Sobic001G007200 Sobic001G007200 Sobic004G141700--Sobic001G007200 Sobic004G141700--Sobic010G193800 Sobic004G141700--Sobic001G402300 Sobic004G141700--Sobic001G226100 Sobic004G141700--Sobic001G054200 Sobic010G018700 Sobic010G018700 Sobic004G141700--Sobic010G018700 Sobic010G083700 Sobic010G083700 Sobic004G141700--Sobic010G083700 Sobic001G439600 Sobic001G439600 Sobic004G141700--Sobic001G439600 Sobic009G232400--Sobic004G141700 Sobic009G232400--Sobic001G402300 Sobic003G350600 Sobic003G350600 Sobic009G232400--Sobic003G350600 Sobic009G232400--Sobic001G226100 Sobic009G232400--Sobic001G007200 Sobic009G232400--Sobic010G083700 Sobic009G232400--Sobic010G251100 Sobic009G232400--Sobic001G054200 Sobic009G232400--Sobic007G118000 Sobic002G268400 Sobic002G268400 Sobic002G306400--Sobic002G268400 Sobic003G250500 Sobic003G250500 Sobic002G306400--Sobic003G250500 Sobic003G273400 Sobic003G273400 Sobic002G306400--Sobic003G273400 Sobic002G306400--Sobic001G226100 Sobic001G309100 Sobic001G309100 Sobic002G306400--Sobic001G309100 Sobic002G306400--Sobic001G402300 Sobic001G136900 Sobic001G136900 Sobic002G306400--Sobic001G136900 Sobic010G146600 Sobic010G146600 Sobic002G306400--Sobic010G146600 Sobic004G074300 Sobic004G074300 Sobic002G306400--Sobic004G074300 Sobic007G045600 Sobic007G045600 Sobic007G118000--Sobic007G045600 Sobic001G033500 Sobic001G033500 Sobic007G118000--Sobic001G033500 Sobic007G118000--Sobic001G402300 Sobic003G374000 Sobic003G374000 Sobic007G118000--Sobic003G374000 Sobic004G072800 Sobic004G072800 Sobic007G118000--Sobic004G072800 Sobic002G281300 Sobic002G281300 Sobic007G118000--Sobic002G281300 Sobic001G067900 Sobic001G067900 Sobic007G118000--Sobic001G067900 Sobic007G118000--Sobic004G141700 Sobic001G323300 Sobic001G323300 Sobic007G118000--Sobic001G323300 Sobic006G252100--Sobic002G268400 Sobic001G152000 Sobic001G152000 Sobic006G252100--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic006G252100--Sobic009G033900 Sobic006G216000 Sobic006G216000 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic006G252100--Sobic001G226100 Sobic006G252100--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G252100--Sobic001G370300 Sobic001G512600--Sobic003G350600 Sobic001G467000 Sobic001G467000 Sobic001G512600--Sobic001G467000 Sobic008G142700 Sobic008G142700 Sobic001G512600--Sobic008G142700 Sobic001G512600--Sobic003G250500 Sobic004G150400 Sobic004G150400 Sobic001G512600--Sobic004G150400 Sobic001G512600--Sobic003G226500 Sobic004G301900 Sobic004G301900 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G372000 Sobic001G372000 Sobic001G512600--Sobic001G372000 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic004G293700 Sobic004G293700 Sobic001G054200--Sobic004G293700 Sobic009G246950 Sobic009G246950 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800
Octagon: transcription factors


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