Gene annotation
Transcriptome id Sobic.004G185600.1
Synonym Sb04g023440
Functional annotation expressed protein
UniProt C5XVK1
Pfam PF07800
Panther DB PTHR31197 PTHR31197:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68140 : Protein of unknown function (DUF1644)
RAP-DB (Rice) LOC_Os02g35840.1 : expressed protein
MaizeGDB (Corn) Zm00025a031673
Brachypodium KQJ99968 , KQJ99967 , PNT61192
Barley -
Wheat TraesCS3A02G128000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
3 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
4 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
5 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
6 Sobic.001G291100 tetraspanin family protein, putative, expressed -
7 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
8 Sobic.008G004400 GIL1, putative, expressed -
9 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
10 Sobic.010G251100 - K03257: translation initiation factor 4A
11 Sobic.001G261456 - -
12 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
13 Sobic.007G200600 ZOS8-11 - C2H2 zinc finger protein, expressed -
14 Sobic.006G278700 expressed protein -
15 Sobic.006G250900 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
16 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
17 Sobic.003G314100 AGAP000951-PA, putative, expressed -
18 Sobic.008G131000 domain of unknown function family protein, expressed -
19 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
20 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1


Gene co-expression network
sample Sobic004G185600 Sobic004G185600 Sobic010G249300 Sobic010G249300 Sobic004G185600--Sobic010G249300 Sobic001G201400 Sobic001G201400 Sobic004G185600--Sobic001G201400 Sobic010G146600 Sobic010G146600 Sobic004G185600--Sobic010G146600 Sobic001G281600 Sobic001G281600 Sobic004G185600--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic004G185600--Sobic009G050900 Sobic001G291100 Sobic001G291100 Sobic004G185600--Sobic001G291100 Sobic002G378200 Sobic002G378200 Sobic004G185600--Sobic002G378200 Sobic008G004400 Sobic008G004400 Sobic004G185600--Sobic008G004400 Sobic001G142100 Sobic001G142100 Sobic004G185600--Sobic001G142100 Sobic010G249300--Sobic004G185600 Sobic010G249300--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic010G249300--Sobic002G317300 Sobic008G083000 Sobic008G083000 Sobic010G249300--Sobic008G083000 Sobic010G249300--Sobic001G291100 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic010G249300--Sobic009G050900 Sobic001G201500 Sobic001G201500 Sobic001G201400--Sobic001G201500 Sobic004G039600 Sobic004G039600 Sobic001G201400--Sobic004G039600 Sobic003G187500 Sobic003G187500 Sobic001G201400--Sobic003G187500 Sobic008G131000 Sobic008G131000 Sobic001G201400--Sobic008G131000 Sobic003G401100 Sobic003G401100 Sobic001G201400--Sobic003G401100 Sobic010G053800 Sobic010G053800 Sobic001G201400--Sobic010G053800 Sobic006G252700 Sobic006G252700 Sobic001G201400--Sobic006G252700 Sobic009G257800 Sobic009G257800 Sobic001G201400--Sobic009G257800 Sobic001G466700 Sobic001G466700 Sobic001G201400--Sobic001G466700 Sobic010G146600--Sobic010G249300 Sobic003G119400 Sobic003G119400 Sobic010G146600--Sobic003G119400 Sobic010G146600--Sobic004G185600 Sobic003G250500 Sobic003G250500 Sobic010G146600--Sobic003G250500 Sobic010G146600--Sobic002G317300 Sobic010G146600--Sobic001G291100 Sobic010G146600--Sobic001G281600 Sobic009G133400 Sobic009G133400 Sobic010G146600--Sobic009G133400 Sobic010G251100 Sobic010G251100 Sobic010G146600--Sobic010G251100 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic003G141500 Sobic003G141500 Sobic009G050900--Sobic003G141500 Sobic007G203200 Sobic007G203200 Sobic009G050900--Sobic007G203200 Sobic009G050900--Sobic001G281600 Sobic009G050900--Sobic008G083000 Sobic001G219600 Sobic001G219600 Sobic009G050900--Sobic001G219600 Sobic007G071200 Sobic007G071200 Sobic009G050900--Sobic007G071200 Sobic008G011100 Sobic008G011100 Sobic009G050900--Sobic008G011100 Sobic001G493200 Sobic001G493200 Sobic009G050900--Sobic001G493200 Sobic010G140400 Sobic010G140400 Sobic009G050900--Sobic010G140400 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G291100--Sobic001G281600 Sobic004G119000 Sobic004G119000 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic004G150400 Sobic004G150400 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic006G088100 Sobic006G088100 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic006G278700 Sobic006G278700 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic004G007300 Sobic004G007300 Sobic002G378200--Sobic004G007300 Sobic004G283000 Sobic004G283000 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic001G028400 Sobic001G028400 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic004G356900 Sobic004G356900 Sobic008G004400--Sobic004G356900 Sobic008G004400--Sobic006G278700 Sobic001G143500 Sobic001G143500 Sobic008G004400--Sobic001G143500 Sobic007G053500 Sobic007G053500 Sobic008G004400--Sobic007G053500 Sobic006G101700 Sobic006G101700 Sobic008G004400--Sobic006G101700 Sobic003G439800 Sobic003G439800 Sobic008G004400--Sobic003G439800 Sobic002G281300 Sobic002G281300 Sobic008G004400--Sobic002G281300 Sobic005G004200 Sobic005G004200 Sobic008G004400--Sobic005G004200 Sobic001G360200 Sobic001G360200 Sobic008G004400--Sobic001G360200 Sobic001G142100--Sobic005G004200 Sobic001G142100--Sobic008G131000 Sobic001G142100--Sobic003G187500 Sobic005G216300 Sobic005G216300 Sobic001G142100--Sobic005G216300 Sobic001G142100--Sobic003G401100 Sobic001G142100--Sobic006G252700 Sobic001G142100--Sobic003G439800 Sobic006G114500 Sobic006G114500 Sobic001G142100--Sobic006G114500 Sobic003G114700 Sobic003G114700 Sobic001G142100--Sobic003G114700
Octagon: transcription factors


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