Gene annotation
Transcriptome id Sobic.010G249300.1
Synonym Sb10g028760, ATPAP28, PAP28
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5Z8V2
Pfam PF00149
Panther DB PTHR32440 PTHR32440:SF2
NCBI CDD KOG1432; Predicted DNA repair exonuclease SIA1
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G57140 : purple acid phosphatase 28
RAP-DB (Rice) LOC_Os06g48570.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041790
Brachypodium KQK17367
Barley HORVU7Hr1G097760.10 , HORVU7Hr1G097760.1 , HORVU7Hr1G097760.8 , HORVU7Hr1G097760.9 , HORVU7Hr1G097760.2 , HORVU7Hr1G097760.3 , HORVU7Hr1G097760.4 , HORVU7Hr1G097760.5 , HORVU7Hr1G097760.6 , HORVU7Hr1G097760.7
Wheat TraesCS7A02G422800 , TraesCS7B02G323200 , TraesCS7D02G415200
Populus -


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cDNA sequences
Sobic.010G249300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G185600 expressed protein -
2 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
3 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
5 Sobic.001G291100 tetraspanin family protein, putative, expressed -
6 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
7 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
8 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
9 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
10 Sobic.003G380400 expressed protein -
11 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
12 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
13 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
14 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
15 Sobic.001G275900 calcium-transporting ATPase, plasma membrane-type, putative, expressed -
16 Sobic.009G112400 OsFBX361 - F-box domain containing protein, expressed -
17 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
18 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
20 Sobic.008G004400 GIL1, putative, expressed -


Gene co-expression network
sample Sobic010G249300 Sobic010G249300 Sobic004G185600 Sobic004G185600 Sobic010G249300--Sobic004G185600 Sobic010G146600 Sobic010G146600 Sobic010G249300--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic010G249300--Sobic002G317300 Sobic008G083000 Sobic008G083000 Sobic010G249300--Sobic008G083000 Sobic001G291100 Sobic001G291100 Sobic010G249300--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic004G185600--Sobic010G249300 Sobic001G201400 Sobic001G201400 Sobic004G185600--Sobic001G201400 Sobic004G185600--Sobic010G146600 Sobic004G185600--Sobic001G281600 Sobic004G185600--Sobic009G050900 Sobic004G185600--Sobic001G291100 Sobic002G378200 Sobic002G378200 Sobic004G185600--Sobic002G378200 Sobic008G004400 Sobic008G004400 Sobic004G185600--Sobic008G004400 Sobic001G142100 Sobic001G142100 Sobic004G185600--Sobic001G142100 Sobic010G146600--Sobic010G249300 Sobic003G119400 Sobic003G119400 Sobic010G146600--Sobic003G119400 Sobic010G146600--Sobic004G185600 Sobic003G250500 Sobic003G250500 Sobic010G146600--Sobic003G250500 Sobic010G146600--Sobic002G317300 Sobic010G146600--Sobic001G291100 Sobic010G146600--Sobic001G281600 Sobic009G133400 Sobic009G133400 Sobic010G146600--Sobic009G133400 Sobic010G251100 Sobic010G251100 Sobic010G146600--Sobic010G251100 Sobic009G199200 Sobic009G199200 Sobic002G317300--Sobic009G199200 Sobic002G317300--Sobic010G249300 Sobic002G317300--Sobic010G146600 Sobic002G317300--Sobic001G281600 Sobic006G032900 Sobic006G032900 Sobic002G317300--Sobic006G032900 Sobic002G166300 Sobic002G166300 Sobic002G317300--Sobic002G166300 Sobic002G317300--Sobic008G083000 Sobic007G067700 Sobic007G067700 Sobic002G317300--Sobic007G067700 Sobic010G279700 Sobic010G279700 Sobic002G317300--Sobic010G279700 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic008G083000--Sobic001G281600 Sobic008G083000--Sobic009G050900 Sobic003G401100 Sobic003G401100 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G291100--Sobic001G281600 Sobic004G119000 Sobic004G119000 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic004G150400 Sobic004G150400 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic006G088100 Sobic006G088100 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic006G047100--Sobic005G084100 Sobic006G056000 Sobic006G056000 Sobic006G047100--Sobic006G056000 Sobic006G047100--Sobic010G249300 Sobic002G192500 Sobic002G192500 Sobic006G047100--Sobic002G192500 Sobic009G112400 Sobic009G112400 Sobic006G047100--Sobic009G112400 Sobic004G232000 Sobic004G232000 Sobic006G047100--Sobic004G232000 Sobic002G131300 Sobic002G131300 Sobic006G047100--Sobic002G131300 Sobic002G076000 Sobic002G076000 Sobic006G047100--Sobic002G076000 Sobic001G057200 Sobic001G057200 Sobic006G047100--Sobic001G057200 Sobic001G467000 Sobic001G467000 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic003G154700 Sobic003G154700 Sobic001G464100--Sobic003G154700 Sobic001G464100--Sobic001G291100 Sobic001G464100--Sobic001G119300 Sobic002G313500 Sobic002G313500 Sobic001G464100--Sobic002G313500 Sobic001G464100--Sobic001G281600 Sobic003G045400 Sobic003G045400 Sobic001G464100--Sobic003G045400 Sobic001G464100--Sobic010G249300 Sobic003G141500 Sobic003G141500 Sobic009G050900--Sobic003G141500 Sobic007G203200 Sobic007G203200 Sobic009G050900--Sobic007G203200 Sobic009G050900--Sobic001G281600 Sobic009G050900--Sobic008G083000 Sobic001G219600 Sobic001G219600 Sobic009G050900--Sobic001G219600 Sobic007G071200 Sobic007G071200 Sobic009G050900--Sobic007G071200 Sobic009G050900--Sobic008G011100 Sobic001G493200 Sobic001G493200 Sobic009G050900--Sobic001G493200 Sobic010G140400 Sobic010G140400 Sobic009G050900--Sobic010G140400
Octagon: transcription factors


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