Gene annotation
Transcriptome id Sobic.001G057200.1
Synonym Sb01g005200, PKP1, PKP-ALPHA
Functional annotation pyruvate kinase, putative, expressed
UniProt A0A1B6QHH0
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF14
NCBI CDD KOG2323; Pyruvate kinase
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G22960 : Pyruvate kinase family protein
RAP-DB (Rice) LOC_Os07g08340.1 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a045180 , Zm00025a008562
Brachypodium KQK20587
Barley HORVU2Hr1G050140.1 , HORVU2Hr1G050140.3 , HORVU2Hr1G050140.4 , HORVU2Hr1G050140.7 , HORVU2Hr1G050140.8
Wheat TraesCS2A02G240200 , TraesCS2D02G237900 , TraesCS2B02G257800
Populus -


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cDNA sequences
Sobic.001G057200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
2 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
6 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
7 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.002G143000 ubiquitin family protein, putative, expressed -
9 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
10 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
11 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
12 Sobic.003G261500 lipase, putative, expressed -
13 Sobic.005G229166 - -
14 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
15 Sobic.003G376400 expressed protein -
16 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
17 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
18 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1
19 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase


Gene co-expression network
sample Sobic001G057200 Sobic001G057200 Sobic010G146600 Sobic010G146600 Sobic001G057200--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic001G057200--Sobic002G317300 Sobic002G092300 Sobic002G092300 Sobic001G057200--Sobic002G092300 Sobic010G249300 Sobic010G249300 Sobic001G057200--Sobic010G249300 Sobic003G372000 Sobic003G372000 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic005G044800 Sobic005G044800 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500 Sobic010G146600--Sobic010G249300 Sobic003G119400 Sobic003G119400 Sobic010G146600--Sobic003G119400 Sobic004G185600 Sobic004G185600 Sobic010G146600--Sobic004G185600 Sobic003G250500 Sobic003G250500 Sobic010G146600--Sobic003G250500 Sobic010G146600--Sobic002G317300 Sobic001G291100 Sobic001G291100 Sobic010G146600--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G146600--Sobic001G281600 Sobic009G133400 Sobic009G133400 Sobic010G146600--Sobic009G133400 Sobic010G251100 Sobic010G251100 Sobic010G146600--Sobic010G251100 Sobic009G199200 Sobic009G199200 Sobic002G317300--Sobic009G199200 Sobic002G317300--Sobic010G249300 Sobic002G317300--Sobic010G146600 Sobic002G317300--Sobic001G281600 Sobic006G032900 Sobic006G032900 Sobic002G317300--Sobic006G032900 Sobic002G166300 Sobic002G166300 Sobic002G317300--Sobic002G166300 Sobic008G083000 Sobic008G083000 Sobic002G317300--Sobic008G083000 Sobic007G067700 Sobic007G067700 Sobic002G317300--Sobic007G067700 Sobic010G279700 Sobic010G279700 Sobic002G317300--Sobic010G279700 Sobic002G092300--Sobic010G279700 Sobic004G250300 Sobic004G250300 Sobic002G092300--Sobic004G250300 Sobic004G021200 Sobic004G021200 Sobic002G092300--Sobic004G021200 Sobic007G115200 Sobic007G115200 Sobic002G092300--Sobic007G115200 Sobic008G092300 Sobic008G092300 Sobic002G092300--Sobic008G092300 Sobic002G092300--Sobic001G281600 Sobic001G000200 Sobic001G000200 Sobic002G092300--Sobic001G000200 Sobic002G092300--Sobic003G250500 Sobic001G016000 Sobic001G016000 Sobic002G092300--Sobic001G016000 Sobic010G249300--Sobic004G185600 Sobic010G249300--Sobic010G146600 Sobic010G249300--Sobic002G317300 Sobic010G249300--Sobic008G083000 Sobic010G249300--Sobic001G291100 Sobic010G249300--Sobic001G281600 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic001G085100 Sobic001G085100 Sobic003G372000--Sobic001G085100 Sobic003G372000--Sobic005G044800 Sobic003G012200 Sobic003G012200 Sobic003G372000--Sobic003G012200 Sobic001G283200 Sobic001G283200 Sobic003G372000--Sobic001G283200 Sobic009G123600 Sobic009G123600 Sobic003G372000--Sobic009G123600 Sobic004G358600 Sobic004G358600 Sobic003G372000--Sobic004G358600 Sobic003G261400 Sobic003G261400 Sobic003G372000--Sobic003G261400 Sobic006G244700 Sobic006G244700 Sobic003G372000--Sobic006G244700 Sobic009G075800 Sobic009G075800 Sobic003G372000--Sobic009G075800 Sobic005G084100 Sobic005G084100 Sobic006G047100--Sobic005G084100 Sobic006G056000 Sobic006G056000 Sobic006G047100--Sobic006G056000 Sobic006G047100--Sobic010G249300 Sobic002G192500 Sobic002G192500 Sobic006G047100--Sobic002G192500 Sobic009G112400 Sobic009G112400 Sobic006G047100--Sobic009G112400 Sobic004G232000 Sobic004G232000 Sobic006G047100--Sobic004G232000 Sobic002G131300 Sobic002G131300 Sobic006G047100--Sobic002G131300 Sobic002G076000 Sobic002G076000 Sobic006G047100--Sobic002G076000 Sobic006G047100--Sobic001G057200 Sobic005G044800--Sobic004G358600 Sobic005G044800--Sobic003G012200 Sobic005G044800--Sobic003G372000 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic010G057900 Sobic010G057900 Sobic002G143000--Sobic010G057900 Sobic001G458700 Sobic001G458700 Sobic002G143000--Sobic001G458700 Sobic004G326600 Sobic004G326600 Sobic002G143000--Sobic004G326600 Sobic004G081800 Sobic004G081800 Sobic002G143000--Sobic004G081800 Sobic002G341800 Sobic002G341800 Sobic002G143000--Sobic002G341800 Sobic005G105500 Sobic005G105500 Sobic002G143000--Sobic005G105500 Sobic006G056600 Sobic006G056600 Sobic002G143000--Sobic006G056600 Sobic001G091900 Sobic001G091900 Sobic002G143000--Sobic001G091900 Sobic002G268400 Sobic002G268400 Sobic002G143000--Sobic002G268400 Sobic006G215300 Sobic006G215300 Sobic006G264500--Sobic006G215300 Sobic006G264500--Sobic001G281600 Sobic002G376300 Sobic002G376300 Sobic006G264500--Sobic002G376300 Sobic003G078800 Sobic003G078800 Sobic006G264500--Sobic003G078800 Sobic006G264500--Sobic001G464100 Sobic001G372000 Sobic001G372000 Sobic006G264500--Sobic001G372000 Sobic006G264500--Sobic001G057200 Sobic001G294200 Sobic001G294200 Sobic006G264500--Sobic001G294200 Sobic006G264500--Sobic002G268400
Octagon: transcription factors


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