Gene annotation
Transcriptome id Sobic.006G264500.1
Synonym Sb06g032710
Functional annotation DHHC zinc finger domain containing protein, expressed
UniProt C5YAG2
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF35
NCBI CDD KOG1313; DHHC-type Zn-finger proteins
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G18620 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os06g20400.5 : DHHC zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057366 , Zm00025a009329
Brachypodium KQJ85263
Barley HORVU2Hr1G120220.5 , HORVU2Hr1G120220.4 , HORVU2Hr1G120220.7 , HORVU2Hr1G120220.6 , HORVU2Hr1G120220.1 , HORVU2Hr1G120220.3 , HORVU2Hr1G120220.2 , HORVU2Hr1G120220.8
Wheat TraesCS2B02G585200 , TraesCS2A02G553400 , TraesCS2D02G554900 , TraesCS2D02G554900
Populus -


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cDNA sequences
Sobic.006G264500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G215300 tetratricopeptide repeat domain containing protein, expressed -
2 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
3 Sobic.002G376300 FYVE zinc finger family protein, expressed -
4 Sobic.003G078800 PB1 domain containing protein, expressed -
5 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
7 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
8 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
9 Sobic.002G268400 expressed protein -
10 Sobic.001G365600 OsPOP8 - Putative Prolyl Oligopeptidase homologue, expressed -
11 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
13 Sobic.006G183000 RING zinc finger protein, putative, expressed -
14 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
15 Sobic.006G278700 expressed protein -
16 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
17 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
18 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
19 Sobic.004G232000 TLD family protein, putative, expressed -
20 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1


Gene co-expression network
sample Sobic006G264500 Sobic006G264500 Sobic006G215300 Sobic006G215300 Sobic006G264500--Sobic006G215300 Sobic001G281600 Sobic001G281600 Sobic006G264500--Sobic001G281600 Sobic002G376300 Sobic002G376300 Sobic006G264500--Sobic002G376300 Sobic003G078800 Sobic003G078800 Sobic006G264500--Sobic003G078800 Sobic001G464100 Sobic001G464100 Sobic006G264500--Sobic001G464100 Sobic001G372000 Sobic001G372000 Sobic006G264500--Sobic001G372000 Sobic001G057200 Sobic001G057200 Sobic006G264500--Sobic001G057200 Sobic001G294200 Sobic001G294200 Sobic006G264500--Sobic001G294200 Sobic002G268400 Sobic002G268400 Sobic006G264500--Sobic002G268400 Sobic004G057400 Sobic004G057400 Sobic006G215300--Sobic004G057400 Sobic004G205600 Sobic004G205600 Sobic006G215300--Sobic004G205600 Sobic006G273200 Sobic006G273200 Sobic006G215300--Sobic006G273200 Sobic006G215300--Sobic001G281600 Sobic009G117300 Sobic009G117300 Sobic006G215300--Sobic009G117300 Sobic001G497300 Sobic001G497300 Sobic006G215300--Sobic001G497300 Sobic003G401000 Sobic003G401000 Sobic006G215300--Sobic003G401000 Sobic009G117400 Sobic009G117400 Sobic006G215300--Sobic009G117400 Sobic009G065100 Sobic009G065100 Sobic006G215300--Sobic009G065100 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic009G238800 Sobic009G238800 Sobic002G376300--Sobic009G238800 Sobic001G048700 Sobic001G048700 Sobic002G376300--Sobic001G048700 Sobic003G219500 Sobic003G219500 Sobic002G376300--Sobic003G219500 Sobic002G378200 Sobic002G378200 Sobic002G376300--Sobic002G378200 Sobic007G118000 Sobic007G118000 Sobic002G376300--Sobic007G118000 Sobic009G054700 Sobic009G054700 Sobic002G376300--Sobic009G054700 Sobic007G115900 Sobic007G115900 Sobic002G376300--Sobic007G115900 Sobic006G148200 Sobic006G148200 Sobic002G376300--Sobic006G148200 Sobic001G067900 Sobic001G067900 Sobic002G376300--Sobic001G067900 Sobic003G078800--Sobic001G294200 Sobic002G122600 Sobic002G122600 Sobic003G078800--Sobic002G122600 Sobic003G078800--Sobic001G372000 Sobic006G228700 Sobic006G228700 Sobic003G078800--Sobic006G228700 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic001G004700 Sobic001G004700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic001G467000 Sobic001G467000 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic003G154700 Sobic003G154700 Sobic001G464100--Sobic003G154700 Sobic001G291100 Sobic001G291100 Sobic001G464100--Sobic001G291100 Sobic001G119300 Sobic001G119300 Sobic001G464100--Sobic001G119300 Sobic002G313500 Sobic002G313500 Sobic001G464100--Sobic002G313500 Sobic001G464100--Sobic001G281600 Sobic003G045400 Sobic003G045400 Sobic001G464100--Sobic003G045400 Sobic010G249300 Sobic010G249300 Sobic001G464100--Sobic010G249300 Sobic001G372000--Sobic001G467000 Sobic004G150400 Sobic004G150400 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G512600 Sobic001G512600 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400 Sobic010G146600 Sobic010G146600 Sobic001G057200--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic001G057200--Sobic002G317300 Sobic002G092300 Sobic002G092300 Sobic001G057200--Sobic002G092300 Sobic001G057200--Sobic010G249300 Sobic003G372000 Sobic003G372000 Sobic001G057200--Sobic003G372000 Sobic001G057200--Sobic006G047100 Sobic005G044800 Sobic005G044800 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic001G057200--Sobic006G264500 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic010G057900 Sobic010G057900 Sobic002G268400--Sobic010G057900 Sobic001G152000 Sobic001G152000 Sobic002G268400--Sobic001G152000 Sobic004G074300 Sobic004G074300 Sobic002G268400--Sobic004G074300 Sobic006G252100 Sobic006G252100 Sobic002G268400--Sobic006G252100 Sobic009G033900 Sobic009G033900 Sobic002G268400--Sobic009G033900 Sobic006G270900 Sobic006G270900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic004G356900 Sobic004G356900 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800
Octagon: transcription factors


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