Gene annotation
Transcriptome id Sobic.002G376300.1
Synonym Sb02g039390
Functional annotation FYVE zinc finger family protein, expressed
UniProt C5X2E8
Pfam PF13637 PF01363
Panther DB PTHR13856 PTHR13856:SF97
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26210 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os07g42640.2 : FYVE zinc finger family protein, expressed
MaizeGDB (Corn) Zm00025a048771
Brachypodium KQK15159 , KQK15158
Barley HORVU2Hr1G030670.5 , HORVU2Hr1G030670.6 , HORVU2Hr1G030670.18 , HORVU2Hr1G030670.19 , HORVU2Hr1G030670.12 , HORVU2Hr1G030670.10 , HORVU2Hr1G030670.11 , HORVU2Hr1G030670.16 , HORVU2Hr1G030670.17 , HORVU2Hr1G030670.14 , HORVU2Hr1G030670.13 , HORVU2Hr1G030670.15 , HORVU2Hr1G030670.22 , HORVU2Hr1G030670.21 , HORVU2Hr1G030670.20 , HORVU2Hr1G030670.1 , HORVU2Hr1G030670.2 , HORVU2Hr1G030670.3 , HORVU2Hr1G030670.4 , HORVU2Hr1G030670.7 , HORVU2Hr1G030670.8 , HORVU2Hr1G030670.9
Wheat TraesCS2A02G166700 , TraesCS2B02G192800 , TraesCS2B02G192800 , TraesCS2D02G174300 , TraesCS2D02G174300
Populus -


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cDNA sequences
Sobic.002G376300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G238800 expressed protein -
2 Sobic.001G048700 TBC domain containing protein, expressed -
3 Sobic.003G219500 adaptin ear-binding coat-associated protein 2, putative, expressed -
4 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
5 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
6 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
7 Sobic.007G115900 SAM domain family protein, expressed -
8 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
10 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
11 Sobic.001G522900 expressed protein -
12 Sobic.003G400100 leaf senescence related protein, putative, expressed -
13 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
14 Sobic.002G202400 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
15 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
16 Sobic.004G072800 expressed protein -
17 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
18 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
19 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
20 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -


Gene co-expression network
sample Sobic002G376300 Sobic002G376300 Sobic009G238800 Sobic009G238800 Sobic002G376300--Sobic009G238800 Sobic001G048700 Sobic001G048700 Sobic002G376300--Sobic001G048700 Sobic003G219500 Sobic003G219500 Sobic002G376300--Sobic003G219500 Sobic002G378200 Sobic002G378200 Sobic002G376300--Sobic002G378200 Sobic007G118000 Sobic007G118000 Sobic002G376300--Sobic007G118000 Sobic009G054700 Sobic009G054700 Sobic002G376300--Sobic009G054700 Sobic007G115900 Sobic007G115900 Sobic002G376300--Sobic007G115900 Sobic006G148200 Sobic006G148200 Sobic002G376300--Sobic006G148200 Sobic001G067900 Sobic001G067900 Sobic002G376300--Sobic001G067900 Sobic010G080200 Sobic010G080200 Sobic009G238800--Sobic010G080200 Sobic006G232000 Sobic006G232000 Sobic009G238800--Sobic006G232000 Sobic006G217700 Sobic006G217700 Sobic009G238800--Sobic006G217700 Sobic001G033500 Sobic001G033500 Sobic009G238800--Sobic001G033500 Sobic009G238800--Sobic002G376300 Sobic009G238800--Sobic006G148200 Sobic009G238800--Sobic001G048700 Sobic009G238800--Sobic001G067900 Sobic001G206900 Sobic001G206900 Sobic009G238800--Sobic001G206900 Sobic003G007500 Sobic003G007500 Sobic001G048700--Sobic003G007500 Sobic001G048700--Sobic006G148200 Sobic002G296300 Sobic002G296300 Sobic001G048700--Sobic002G296300 Sobic001G048700--Sobic002G376300 Sobic009G228700 Sobic009G228700 Sobic001G048700--Sobic009G228700 Sobic001G048700--Sobic009G238800 Sobic004G072800 Sobic004G072800 Sobic001G048700--Sobic004G072800 Sobic001G323000 Sobic001G323000 Sobic001G048700--Sobic001G323000 Sobic001G048700--Sobic007G118000 Sobic003G219500--Sobic002G376300 Sobic003G400100 Sobic003G400100 Sobic003G219500--Sobic003G400100 Sobic001G127000 Sobic001G127000 Sobic003G219500--Sobic001G127000 Sobic003G219500--Sobic009G238800 Sobic003G219500--Sobic002G378200 Sobic003G219500--Sobic001G067900 Sobic003G187200 Sobic003G187200 Sobic003G219500--Sobic003G187200 Sobic003G051200 Sobic003G051200 Sobic003G219500--Sobic003G051200 Sobic006G034800 Sobic006G034800 Sobic003G219500--Sobic006G034800 Sobic006G278700 Sobic006G278700 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic004G007300 Sobic004G007300 Sobic002G378200--Sobic004G007300 Sobic004G283000 Sobic004G283000 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic001G028400 Sobic001G028400 Sobic002G378200--Sobic001G028400 Sobic002G378200--Sobic003G187200 Sobic007G045600 Sobic007G045600 Sobic007G118000--Sobic007G045600 Sobic007G118000--Sobic001G033500 Sobic001G402300 Sobic001G402300 Sobic007G118000--Sobic001G402300 Sobic003G374000 Sobic003G374000 Sobic007G118000--Sobic003G374000 Sobic007G118000--Sobic004G072800 Sobic002G281300 Sobic002G281300 Sobic007G118000--Sobic002G281300 Sobic007G118000--Sobic001G067900 Sobic004G141700 Sobic004G141700 Sobic007G118000--Sobic004G141700 Sobic001G323300 Sobic001G323300 Sobic007G118000--Sobic001G323300 Sobic001G031200 Sobic001G031200 Sobic009G054700--Sobic001G031200 Sobic009G054700--Sobic002G132300 Sobic010G168600 Sobic010G168600 Sobic009G054700--Sobic010G168600 Sobic002G256300 Sobic002G256300 Sobic009G054700--Sobic002G256300 Sobic002G202400 Sobic002G202400 Sobic009G054700--Sobic002G202400 Sobic004G034400 Sobic004G034400 Sobic009G054700--Sobic004G034400 Sobic010G067700 Sobic010G067700 Sobic009G054700--Sobic010G067700 Sobic008G128600 Sobic008G128600 Sobic009G054700--Sobic008G128600 Sobic004G104900 Sobic004G104900 Sobic009G054700--Sobic004G104900 Sobic004G316800 Sobic004G316800 Sobic007G115900--Sobic004G316800 Sobic001G522900 Sobic001G522900 Sobic007G115900--Sobic001G522900 Sobic006G092800 Sobic006G092800 Sobic007G115900--Sobic006G092800 Sobic001G043900 Sobic001G043900 Sobic007G115900--Sobic001G043900 Sobic009G032300 Sobic009G032300 Sobic007G115900--Sobic009G032300 Sobic006G258900 Sobic006G258900 Sobic007G115900--Sobic006G258900 Sobic007G115900--Sobic002G378200 Sobic007G115900--Sobic004G007300 Sobic003G211700 Sobic003G211700 Sobic007G115900--Sobic003G211700 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic001G085100 Sobic001G085100 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic006G148200--Sobic001G323000 Sobic006G148200--Sobic009G228700 Sobic006G148200--Sobic001G033500 Sobic006G148200--Sobic001G206900 Sobic010G000900 Sobic010G000900 Sobic006G148200--Sobic010G000900 Sobic006G148200--Sobic001G048700 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic006G257001 Sobic006G257001 Sobic001G067900--Sobic006G257001 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500
Octagon: transcription factors


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