Gene annotation
Transcriptome id Sobic.010G274500.2
Synonym Sb10g030840, CAT2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
catalase isozyme B, putative, expressed
UniProt C5Z2J6
Pfam PF06628 PF00199
Panther DB PTHR11465 PTHR11465:SF20
NCBI CDD -
KEGG Orthology K03781; katE, CAT, catB, catalase
Gene Ontology GO:0004096; catalase activity GO:0006979response to oxidative stress


Orthologs (automatic annotation)
TAIR AT4G35090 : catalase 2
RAP-DB (Rice) LOC_Os06g51150.1 : catalase isozyme B, putative, expressed
MaizeGDB (Corn) Zm00025a018541
Brachypodium KQK16658
Barley HORVU7Hr1G072700.1 , HORVU7Hr1G121700.8 , HORVU7Hr1G121700.1 , HORVU7Hr1G121700.2 , HORVU7Hr1G121700.3 , HORVU7Hr1G121700.4 , HORVU7Hr1G121700.5 , HORVU7Hr1G121700.6 , HORVU7Hr1G121700.7
Wheat TraesCS7A02G549900 , TraesCS7B02G473400 , TraesCSU02G105300 , TraesCS7A02G549800 , TraesCS7A02G549800
Populus PNT47170 , PNT47166 , PNT47167 , PNT47168 , PNT47169 , PNT38674 , PNT38672 , PNT38673 , PNT38671


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cDNA sequences
Sobic.010G274500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
2 Sobic.002G376300 FYVE zinc finger family protein, expressed -
3 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
4 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase
5 Sobic.002G392700 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
6 Sobic.005G229166 - -
7 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
8 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
9 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
10 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
11 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
12 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
13 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
14 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
15 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
16 Sobic.006G239800 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
17 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
18 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
20 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20


Gene co-expression network
sample Sobic010G274500 Sobic010G274500 Sobic010G188400 Sobic010G188400 Sobic010G274500--Sobic010G188400 Sobic002G376300 Sobic002G376300 Sobic010G274500--Sobic002G376300 Sobic009G177400 Sobic009G177400 Sobic010G274500--Sobic009G177400 Sobic008G156300 Sobic008G156300 Sobic010G274500--Sobic008G156300 Sobic002G392700 Sobic002G392700 Sobic010G274500--Sobic002G392700 Sobic005G229166 Sobic005G229166 Sobic010G274500--Sobic005G229166 Sobic001G120300 Sobic001G120300 Sobic010G274500--Sobic001G120300 Sobic002G189400 Sobic002G189400 Sobic010G274500--Sobic002G189400 Sobic003G145900 Sobic003G145900 Sobic010G274500--Sobic003G145900 Sobic010G188400--Sobic010G274500 Sobic007G202600 Sobic007G202600 Sobic010G188400--Sobic007G202600 Sobic008G147700 Sobic008G147700 Sobic010G188400--Sobic008G147700 Sobic010G188400--Sobic001G120300 Sobic001G427100 Sobic001G427100 Sobic010G188400--Sobic001G427100 Sobic010G188400--Sobic003G145900 Sobic003G305200 Sobic003G305200 Sobic010G188400--Sobic003G305200 Sobic009G148300 Sobic009G148300 Sobic010G188400--Sobic009G148300 Sobic002G303000 Sobic002G303000 Sobic010G188400--Sobic002G303000 Sobic009G238800 Sobic009G238800 Sobic002G376300--Sobic009G238800 Sobic001G048700 Sobic001G048700 Sobic002G376300--Sobic001G048700 Sobic003G219500 Sobic003G219500 Sobic002G376300--Sobic003G219500 Sobic002G378200 Sobic002G378200 Sobic002G376300--Sobic002G378200 Sobic007G118000 Sobic007G118000 Sobic002G376300--Sobic007G118000 Sobic009G054700 Sobic009G054700 Sobic002G376300--Sobic009G054700 Sobic007G115900 Sobic007G115900 Sobic002G376300--Sobic007G115900 Sobic006G148200 Sobic006G148200 Sobic002G376300--Sobic006G148200 Sobic001G067900 Sobic001G067900 Sobic002G376300--Sobic001G067900 Sobic002G114800 Sobic002G114800 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic003G354400 Sobic003G354400 Sobic009G177400--Sobic003G354400 Sobic009G177400--Sobic010G274500 Sobic002G175500 Sobic002G175500 Sobic009G177400--Sobic002G175500 Sobic004G163300 Sobic004G163300 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic007G120800 Sobic007G120800 Sobic008G156300--Sobic007G120800 Sobic006G203100 Sobic006G203100 Sobic008G156300--Sobic006G203100 Sobic001G432300 Sobic001G432300 Sobic008G156300--Sobic001G432300 Sobic008G156300--Sobic010G274500 Sobic008G156300--Sobic005G229166 Sobic010G050200 Sobic010G050200 Sobic008G156300--Sobic010G050200 Sobic008G156300--Sobic002G114800 Sobic002G306700 Sobic002G306700 Sobic008G156300--Sobic002G306700 Sobic001G540100 Sobic001G540100 Sobic008G156300--Sobic001G540100 Sobic002G392700--Sobic002G189400 Sobic010G106900 Sobic010G106900 Sobic002G392700--Sobic010G106900 Sobic001G389800 Sobic001G389800 Sobic002G392700--Sobic001G389800 Sobic002G409800 Sobic002G409800 Sobic002G392700--Sobic002G409800 Sobic006G281500 Sobic006G281500 Sobic002G392700--Sobic006G281500 Sobic010G017800 Sobic010G017800 Sobic002G392700--Sobic010G017800 Sobic004G325400 Sobic004G325400 Sobic002G392700--Sobic004G325400 Sobic010G249300 Sobic010G249300 Sobic002G392700--Sobic010G249300 Sobic002G317300 Sobic002G317300 Sobic002G392700--Sobic002G317300 Sobic001G057200 Sobic001G057200 Sobic005G229166--Sobic001G057200 Sobic005G229166--Sobic010G274500 Sobic005G091600 Sobic005G091600 Sobic005G229166--Sobic005G091600 Sobic005G229166--Sobic008G156300 Sobic002G092300 Sobic002G092300 Sobic005G229166--Sobic002G092300 Sobic004G057800 Sobic004G057800 Sobic005G229166--Sobic004G057800 Sobic010G080200 Sobic010G080200 Sobic005G229166--Sobic010G080200 Sobic010G067700 Sobic010G067700 Sobic005G229166--Sobic010G067700 Sobic005G229166--Sobic008G147700 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic004G127700 Sobic004G127700 Sobic001G120300--Sobic004G127700 Sobic010G084000 Sobic010G084000 Sobic001G120300--Sobic010G084000 Sobic001G123000 Sobic001G123000 Sobic001G120300--Sobic001G123000 Sobic010G205800 Sobic010G205800 Sobic001G120300--Sobic010G205800 Sobic001G000200 Sobic001G000200 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic001G120300--Sobic002G092300 Sobic010G228500 Sobic010G228500 Sobic002G189400--Sobic010G228500 Sobic004G339100 Sobic004G339100 Sobic002G189400--Sobic004G339100 Sobic006G083600 Sobic006G083600 Sobic002G189400--Sobic006G083600 Sobic002G189400--Sobic009G148300 Sobic002G189400--Sobic007G202600 Sobic004G113400 Sobic004G113400 Sobic002G189400--Sobic004G113400 Sobic002G189400--Sobic004G127700 Sobic008G099800 Sobic008G099800 Sobic002G189400--Sobic008G099800 Sobic002G111600 Sobic002G111600 Sobic002G189400--Sobic002G111600 Sobic009G235900 Sobic009G235900 Sobic003G145900--Sobic009G235900 Sobic008G160700 Sobic008G160700 Sobic003G145900--Sobic008G160700 Sobic005G007800 Sobic005G007800 Sobic003G145900--Sobic005G007800 Sobic004G330900 Sobic004G330900 Sobic003G145900--Sobic004G330900 Sobic001G221100 Sobic001G221100 Sobic003G145900--Sobic001G221100 Sobic010G042900 Sobic010G042900 Sobic003G145900--Sobic010G042900 Sobic003G145900--Sobic002G303000 Sobic006G114500 Sobic006G114500 Sobic003G145900--Sobic006G114500 Sobic004G037900 Sobic004G037900 Sobic003G145900--Sobic004G037900
Octagon: transcription factors


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