Gene annotation
Transcriptome id Sobic.002G114800.1
Synonym Sb02g009790, CPK16, SORBI_3002G114800 , SORBIDRAFT_02g009790
Functional annotation CDPK - calcium-dependent protein kinase 18 (PubMedID : 31721651)
CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5X4C2
Pfam PF14531 PF13499
Panther DB PTHR24349 PTHR24349:SF123
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17890 : calcium-dependent protein kinase 16
RAP-DB (Rice) LOC_Os07g22710.1 : CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a018805 , Zm00025a013334
Brachypodium KQJ93073 , KQK20120 , KQK20121 , KQK20122 , PNT76740
Barley HORVU6Hr1G014700.6 , HORVU6Hr1G014700.4 , HORVU6Hr1G014700.5 , HORVU6Hr1G014700.2 , HORVU2Hr1G054370.3 , HORVU2Hr1G054370.2 , HORVU2Hr1G054370.1
Wheat TraesCS6A02G089400 , TraesCSU02G016900 , TraesCS2D02G245700 , TraesCS2A02G239900 , TraesCS6B02G111800
Populus -


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cDNA sequences
Sobic.002G114800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
2 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
3 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
4 Sobic.004G163300 protein kinase domain containing protein, expressed K14510: serine/threonine-protein kinase CTR1
5 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
6 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
7 Sobic.002G306700 expressed protein -
8 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
9 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
10 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
11 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
12 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
13 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
14 Sobic.001G456100 integral membrane protein, putative, expressed -
15 Sobic.009G088100 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.005G075600 rp3 protein, putative, expressed -
17 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase
18 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
19 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
20 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G114800 Sobic002G114800 Sobic001G049200 Sobic001G049200 Sobic002G114800--Sobic001G049200 Sobic009G177400 Sobic009G177400 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic004G163300 Sobic004G163300 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G306700 Sobic002G306700 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic001G540100 Sobic001G540100 Sobic002G114800--Sobic001G540100 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic002G242500 Sobic002G242500 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic002G294200 Sobic002G294200 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic006G176600 Sobic006G176600 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic003G354400 Sobic003G354400 Sobic009G177400--Sobic003G354400 Sobic010G274500 Sobic010G274500 Sobic009G177400--Sobic010G274500 Sobic002G175500 Sobic002G175500 Sobic009G177400--Sobic002G175500 Sobic009G177400--Sobic004G163300 Sobic009G177400--Sobic007G098400 Sobic009G220800 Sobic009G220800 Sobic001G328000--Sobic009G220800 Sobic001G328000--Sobic002G114800 Sobic007G092600 Sobic007G092600 Sobic001G328000--Sobic007G092600 Sobic007G128600 Sobic007G128600 Sobic001G328000--Sobic007G128600 Sobic005G024900 Sobic005G024900 Sobic001G328000--Sobic005G024900 Sobic003G106300 Sobic003G106300 Sobic001G328000--Sobic003G106300 Sobic001G328000--Sobic001G540100 Sobic001G328000--Sobic009G177400 Sobic005G075600 Sobic005G075600 Sobic001G328000--Sobic005G075600 Sobic004G163300--Sobic002G114800 Sobic004G163300--Sobic009G177400 Sobic004G354400 Sobic004G354400 Sobic004G163300--Sobic004G354400 Sobic001G201500 Sobic001G201500 Sobic004G163300--Sobic001G201500 Sobic010G242900 Sobic010G242900 Sobic004G163300--Sobic010G242900 Sobic003G313400 Sobic003G313400 Sobic004G163300--Sobic003G313400 Sobic009G229300 Sobic009G229300 Sobic004G163300--Sobic009G229300 Sobic004G163300--Sobic002G306700 Sobic004G163300--Sobic001G049200 Sobic004G173600--Sobic002G114800 Sobic010G193900 Sobic010G193900 Sobic004G173600--Sobic010G193900 Sobic004G173600--Sobic001G049200 Sobic010G002400 Sobic010G002400 Sobic004G173600--Sobic010G002400 Sobic002G187300 Sobic002G187300 Sobic004G173600--Sobic002G187300 Sobic003G280300 Sobic003G280300 Sobic004G173600--Sobic003G280300 Sobic004G173600--Sobic006G176600 Sobic004G173600--Sobic001G540100 Sobic004G173600--Sobic004G132300 Sobic010G045400 Sobic010G045400 Sobic009G102300--Sobic010G045400 Sobic006G230300 Sobic006G230300 Sobic009G102300--Sobic006G230300 Sobic009G102300--Sobic002G114800 Sobic008G004100 Sobic008G004100 Sobic009G102300--Sobic008G004100 Sobic009G246100 Sobic009G246100 Sobic009G102300--Sobic009G246100 Sobic003G215200 Sobic003G215200 Sobic009G102300--Sobic003G215200 Sobic006G130501 Sobic006G130501 Sobic009G102300--Sobic006G130501 Sobic004G161900 Sobic004G161900 Sobic009G102300--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic009G102300--Sobic010G218300 Sobic004G079700 Sobic004G079700 Sobic002G306700--Sobic004G079700 Sobic002G306700--Sobic002G114800 Sobic003G432100 Sobic003G432100 Sobic002G306700--Sobic003G432100 Sobic002G408800 Sobic002G408800 Sobic002G306700--Sobic002G408800 Sobic008G156300 Sobic008G156300 Sobic002G306700--Sobic008G156300 Sobic007G120800 Sobic007G120800 Sobic002G306700--Sobic007G120800 Sobic006G243500 Sobic006G243500 Sobic002G306700--Sobic006G243500 Sobic002G306700--Sobic004G163300 Sobic002G306700--Sobic005G075600 Sobic003G017601 Sobic003G017601 Sobic005G134600--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic005G134600--Sobic001G067800 Sobic005G134600--Sobic004G161900 Sobic001G218500 Sobic001G218500 Sobic005G134600--Sobic001G218500 Sobic003G287450 Sobic003G287450 Sobic005G134600--Sobic003G287450 Sobic007G120000 Sobic007G120000 Sobic005G134600--Sobic007G120000 Sobic004G106300 Sobic004G106300 Sobic005G134600--Sobic004G106300 Sobic003G287400 Sobic003G287400 Sobic005G134600--Sobic003G287400 Sobic005G134600--Sobic006G230300 Sobic001G540100--Sobic002G114800 Sobic001G540100--Sobic004G173600 Sobic001G540100--Sobic007G092600 Sobic001G057200 Sobic001G057200 Sobic001G540100--Sobic001G057200 Sobic001G540100--Sobic009G177400 Sobic001G540100--Sobic010G274500 Sobic001G540100--Sobic008G156300 Sobic001G540100--Sobic002G187300 Sobic010G084000 Sobic010G084000 Sobic001G540100--Sobic010G084000
Octagon: transcription factors


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