Gene annotation
Transcriptome id Sobic.009G102300.1
Synonym Sb09g016230
Functional annotation hydrolase, acting on glycosyl bonds, putative, expressed
UniProt A0A1B6P860
Pfam PF03644
Panther DB PTHR13246 PTHR13246:SF1
NCBI CDD -
KEGG Orthology K01227; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
Gene Ontology GO:0005737; cytoplasm


Orthologs (automatic annotation)
TAIR AT5G05460 : Glycosyl hydrolase family 85
RAP-DB (Rice) LOC_Os05g27960.1 : hydrolase, acting on glycosyl bonds, putative, expressed
MaizeGDB (Corn) Zm00025a037175
Brachypodium KQK14064 , PNT74403 , PNT74402
Barley HORVU1Hr1G060330.1 , HORVU1Hr1G060380.1
Wheat TraesCS1B02G235600 , TraesCS1D02G223900 , TraesCS1D02G223900 , TraesCS1A02G222200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
2 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.008G004100 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
5 Sobic.009G246100 X8 domain containing protein, expressed -
6 Sobic.003G215200 expressed protein -
7 Sobic.006G130501 - -
8 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
9 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
10 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
11 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
12 Sobic.001G258600 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
14 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
15 Sobic.002G303700 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
16 Sobic.001G131100 expressed protein -
17 Sobic.003G017601 - -
18 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
19 Sobic.001G187000 4-coumarate--CoA ligase-like 7, putative, expressed K01904: 4-coumarate--CoA ligase
20 Sobic.008G134300 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic009G102300 Sobic009G102300 Sobic010G045400 Sobic010G045400 Sobic009G102300--Sobic010G045400 Sobic006G230300 Sobic006G230300 Sobic009G102300--Sobic006G230300 Sobic002G114800 Sobic002G114800 Sobic009G102300--Sobic002G114800 Sobic008G004100 Sobic008G004100 Sobic009G102300--Sobic008G004100 Sobic009G246100 Sobic009G246100 Sobic009G102300--Sobic009G246100 Sobic003G215200 Sobic003G215200 Sobic009G102300--Sobic003G215200 Sobic006G130501 Sobic006G130501 Sobic009G102300--Sobic006G130501 Sobic004G161900 Sobic004G161900 Sobic009G102300--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic009G102300--Sobic010G218300 Sobic008G037900 Sobic008G037900 Sobic010G045400--Sobic008G037900 Sobic003G017601 Sobic003G017601 Sobic010G045400--Sobic003G017601 Sobic003G368000 Sobic003G368000 Sobic010G045400--Sobic003G368000 Sobic010G045400--Sobic004G161900 Sobic010G045400--Sobic006G230300 Sobic001G299100 Sobic001G299100 Sobic010G045400--Sobic001G299100 Sobic008G191400 Sobic008G191400 Sobic010G045400--Sobic008G191400 Sobic001G218500 Sobic001G218500 Sobic010G045400--Sobic001G218500 Sobic010G213600 Sobic010G213600 Sobic010G045400--Sobic010G213600 Sobic006G230300--Sobic001G299100 Sobic003G417100 Sobic003G417100 Sobic006G230300--Sobic003G417100 Sobic006G092700 Sobic006G092700 Sobic006G230300--Sobic006G092700 Sobic006G230300--Sobic008G191400 Sobic006G230300--Sobic003G215200 Sobic010G028100 Sobic010G028100 Sobic006G230300--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G230300--Sobic003G000100 Sobic010G194100 Sobic010G194100 Sobic006G230300--Sobic010G194100 Sobic006G230300--Sobic003G017601 Sobic001G049200 Sobic001G049200 Sobic002G114800--Sobic001G049200 Sobic009G177400 Sobic009G177400 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic004G163300 Sobic004G163300 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic002G114800--Sobic009G102300 Sobic002G306700 Sobic002G306700 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic001G540100 Sobic001G540100 Sobic002G114800--Sobic001G540100 Sobic002G392800 Sobic002G392800 Sobic008G004100--Sobic002G392800 Sobic001G242800 Sobic001G242800 Sobic008G004100--Sobic001G242800 Sobic009G213600 Sobic009G213600 Sobic008G004100--Sobic009G213600 Sobic008G004100--Sobic006G230300 Sobic008G004100--Sobic009G102300 Sobic008G004100--Sobic004G161900 Sobic008G004100--Sobic010G218300 Sobic002G280700 Sobic002G280700 Sobic008G004100--Sobic002G280700 Sobic001G476300 Sobic001G476300 Sobic008G004100--Sobic001G476300 Sobic001G163800 Sobic001G163800 Sobic009G246100--Sobic001G163800 Sobic009G246100--Sobic010G045400 Sobic005G177400 Sobic005G177400 Sobic009G246100--Sobic005G177400 Sobic005G022500 Sobic005G022500 Sobic009G246100--Sobic005G022500 Sobic009G246100--Sobic003G368000 Sobic009G246100--Sobic003G017601 Sobic001G503000 Sobic001G503000 Sobic009G246100--Sobic001G503000 Sobic005G131301 Sobic005G131301 Sobic009G246100--Sobic005G131301 Sobic005G018200 Sobic005G018200 Sobic009G246100--Sobic005G018200 Sobic003G215200--Sobic003G417100 Sobic003G215200--Sobic006G230300 Sobic004G262200 Sobic004G262200 Sobic003G215200--Sobic004G262200 Sobic003G157600 Sobic003G157600 Sobic003G215200--Sobic003G157600 Sobic003G215200--Sobic010G194100 Sobic006G157900 Sobic006G157900 Sobic003G215200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic003G215200--Sobic002G183700 Sobic002G042200 Sobic002G042200 Sobic003G215200--Sobic002G042200 Sobic003G228600 Sobic003G228600 Sobic003G215200--Sobic003G228600 Sobic006G098200 Sobic006G098200 Sobic006G130501--Sobic006G098200 Sobic009G133900 Sobic009G133900 Sobic006G130501--Sobic009G133900 Sobic007G020300 Sobic007G020300 Sobic006G130501--Sobic007G020300 Sobic006G213100 Sobic006G213100 Sobic006G130501--Sobic006G213100 Sobic001G215900 Sobic001G215900 Sobic006G130501--Sobic001G215900 Sobic010G242900 Sobic010G242900 Sobic006G130501--Sobic010G242900 Sobic002G168600 Sobic002G168600 Sobic006G130501--Sobic002G168600 Sobic006G130501--Sobic009G102300 Sobic006G033700 Sobic006G033700 Sobic006G130501--Sobic006G033700 Sobic004G161900--Sobic003G368000 Sobic004G161900--Sobic003G017601 Sobic004G161900--Sobic010G045400 Sobic004G161900--Sobic008G037900 Sobic001G460400 Sobic001G460400 Sobic004G161900--Sobic001G460400 Sobic004G161900--Sobic001G218500 Sobic003G079100 Sobic003G079100 Sobic004G161900--Sobic003G079100 Sobic002G383900 Sobic002G383900 Sobic004G161900--Sobic002G383900 Sobic003G020500 Sobic003G020500 Sobic004G161900--Sobic003G020500 Sobic010G218300--Sobic001G460400 Sobic002G283900 Sobic002G283900 Sobic010G218300--Sobic002G283900 Sobic010G218300--Sobic004G161900 Sobic010G218300--Sobic010G045400 Sobic006G160900 Sobic006G160900 Sobic010G218300--Sobic006G160900 Sobic009G238900 Sobic009G238900 Sobic010G218300--Sobic009G238900 Sobic010G218300--Sobic008G191400 Sobic009G221500 Sobic009G221500 Sobic010G218300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G218300--Sobic001G245800
Octagon: transcription factors


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