Gene annotation
Transcriptome id Sobic.009G246100.1
Synonym Sb09g029700
Functional annotation X8 domain containing protein, expressed
UniProt C5YWG4
Pfam PF07983
Panther DB PTHR32227
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30933 : Carbohydrate-binding X8 domain superfamily protein
RAP-DB (Rice) LOC_Os05g50490.1 : X8 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036713 , Zm00025a028320 , Zm00025a044717
Brachypodium PNT70656 , KQK04688 , KQK08863
Barley HORVU3Hr1G056800.2 , HORVU3Hr1G056800.3 , HORVU3Hr1G056800.1 , HORVU3Hr1G056800.6 , HORVU3Hr1G056800.7 , HORVU3Hr1G056800.4 , HORVU3Hr1G056800.5 , HORVU3Hr1G056800.8 , HORVU3Hr1G056800.9 , HORVU3Hr1G056800.10 , HORVU3Hr1G056800.11 , HORVU1Hr1G091830.4 , HORVU1Hr1G091830.2 , HORVU1Hr1G091830.3
Wheat TraesCS3B02G257100 , TraesCS1A02G420600 , TraesCS1D02G428500 , TraesCS1B02G451800 , TraesCS3A02G227300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G163800 No apical meristem protein, putative, expressed -
2 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
3 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
5 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
6 Sobic.003G017601 - -
7 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.005G131301 - -
9 Sobic.005G018200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside-triphosphatase, putative, expressed K14641: apyrase
10 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
11 Sobic.005G115300 expressed protein -
12 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
13 Sobic.006G229100 receptor-like kinase, putative, expressed -
14 Sobic.010G096700 leaf senescence related protein, putative, expressed -
15 Sobic.006G201000 WRKY37, expressed -
16 Sobic.001G506600 exostosin family domain containing protein, expressed -
17 Sobic.002G120400 flavin monooxygenase, putative, expressed -
18 Sobic.006G108300 expressed protein -
19 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
20 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase


Gene co-expression network
sample Sobic009G246100 Sobic009G246100 Sobic001G163800 Sobic001G163800 Sobic009G246100--Sobic001G163800 Sobic010G045400 Sobic010G045400 Sobic009G246100--Sobic010G045400 Sobic005G177400 Sobic005G177400 Sobic009G246100--Sobic005G177400 Sobic005G022500 Sobic005G022500 Sobic009G246100--Sobic005G022500 Sobic003G368000 Sobic003G368000 Sobic009G246100--Sobic003G368000 Sobic003G017601 Sobic003G017601 Sobic009G246100--Sobic003G017601 Sobic001G503000 Sobic001G503000 Sobic009G246100--Sobic001G503000 Sobic005G131301 Sobic005G131301 Sobic009G246100--Sobic005G131301 Sobic005G018200 Sobic005G018200 Sobic009G246100--Sobic005G018200 Sobic001G163800--Sobic005G022500 Sobic004G193500 Sobic004G193500 Sobic001G163800--Sobic004G193500 Sobic001G250100 Sobic001G250100 Sobic001G163800--Sobic001G250100 Sobic003G287200 Sobic003G287200 Sobic001G163800--Sobic003G287200 Sobic008G133000 Sobic008G133000 Sobic001G163800--Sobic008G133000 Sobic001G002800 Sobic001G002800 Sobic001G163800--Sobic001G002800 Sobic001G163800--Sobic001G503000 Sobic001G471800 Sobic001G471800 Sobic001G163800--Sobic001G471800 Sobic009G250100 Sobic009G250100 Sobic001G163800--Sobic009G250100 Sobic008G037900 Sobic008G037900 Sobic010G045400--Sobic008G037900 Sobic010G045400--Sobic003G017601 Sobic010G045400--Sobic003G368000 Sobic004G161900 Sobic004G161900 Sobic010G045400--Sobic004G161900 Sobic006G230300 Sobic006G230300 Sobic010G045400--Sobic006G230300 Sobic001G299100 Sobic001G299100 Sobic010G045400--Sobic001G299100 Sobic008G191400 Sobic008G191400 Sobic010G045400--Sobic008G191400 Sobic001G218500 Sobic001G218500 Sobic010G045400--Sobic001G218500 Sobic010G213600 Sobic010G213600 Sobic010G045400--Sobic010G213600 Sobic003G322100 Sobic003G322100 Sobic005G177400--Sobic003G322100 Sobic007G073000 Sobic007G073000 Sobic005G177400--Sobic007G073000 Sobic005G177400--Sobic001G503000 Sobic005G177400--Sobic004G193500 Sobic001G274400 Sobic001G274400 Sobic005G177400--Sobic001G274400 Sobic010G082000 Sobic010G082000 Sobic005G177400--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic005G177400--Sobic001G360500 Sobic010G096700 Sobic010G096700 Sobic005G177400--Sobic010G096700 Sobic006G092700 Sobic006G092700 Sobic005G177400--Sobic006G092700 Sobic001G506600 Sobic001G506600 Sobic005G022500--Sobic001G506600 Sobic005G219700 Sobic005G219700 Sobic005G022500--Sobic005G219700 Sobic005G022500--Sobic001G002800 Sobic005G022500--Sobic001G503000 Sobic007G020700 Sobic007G020700 Sobic005G022500--Sobic007G020700 Sobic005G022500--Sobic001G163800 Sobic005G022500--Sobic008G133000 Sobic007G172500 Sobic007G172500 Sobic005G022500--Sobic007G172500 Sobic002G376100 Sobic002G376100 Sobic005G022500--Sobic002G376100 Sobic003G368000--Sobic004G161900 Sobic003G368000--Sobic008G037900 Sobic003G099000 Sobic003G099000 Sobic003G368000--Sobic003G099000 Sobic003G368000--Sobic010G045400 Sobic003G368000--Sobic003G017601 Sobic010G097200 Sobic010G097200 Sobic003G368000--Sobic010G097200 Sobic010G191700 Sobic010G191700 Sobic003G368000--Sobic010G191700 Sobic003G079100 Sobic003G079100 Sobic003G368000--Sobic003G079100 Sobic002G391400 Sobic002G391400 Sobic003G368000--Sobic002G391400 Sobic003G017601--Sobic001G218500 Sobic001G342000 Sobic001G342000 Sobic003G017601--Sobic001G342000 Sobic002G183750 Sobic002G183750 Sobic003G017601--Sobic002G183750 Sobic002G111900 Sobic002G111900 Sobic003G017601--Sobic002G111900 Sobic003G017601--Sobic003G079100 Sobic003G017601--Sobic010G213600 Sobic003G020500 Sobic003G020500 Sobic003G017601--Sobic003G020500 Sobic005G223700 Sobic005G223700 Sobic003G017601--Sobic005G223700 Sobic005G175900 Sobic005G175900 Sobic003G017601--Sobic005G175900 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic005G131301--Sobic009G246100 Sobic005G131200 Sobic005G131200 Sobic005G131301--Sobic005G131200 Sobic002G081850 Sobic002G081850 Sobic005G131301--Sobic002G081850 Sobic005G197350 Sobic005G197350 Sobic005G131301--Sobic005G197350 Sobic005G066300 Sobic005G066300 Sobic005G131301--Sobic005G066300 Sobic005G066500 Sobic005G066500 Sobic005G131301--Sobic005G066500 Sobic005G131301--Sobic001G163800 Sobic007G119750 Sobic007G119750 Sobic005G131301--Sobic007G119750 Sobic005G066200 Sobic005G066200 Sobic005G131301--Sobic005G066200 Sobic002G195600 Sobic002G195600 Sobic005G018200--Sobic002G195600 Sobic005G018200--Sobic008G138900 Sobic005G018200--Sobic007G073000 Sobic005G018200--Sobic001G503000 Sobic005G075400 Sobic005G075400 Sobic005G018200--Sobic005G075400 Sobic005G018200--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic005G018200--Sobic006G196400 Sobic005G018200--Sobic005G177400 Sobic005G052700 Sobic005G052700 Sobic005G018200--Sobic005G052700
Octagon: transcription factors


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