Gene annotation
Transcriptome id Sobic.001G002800.1,Sobic.001G002800.2
Synonym Sb01g000365
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence (PubMedID : 27586543)
expressed protein
UniProt C5WRV3 , A0A1Z5S498
Pfam PF14389 PF04784
Panther DB PTHR23054 PTHR23054:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G60720 : Protein of unknown function, DUF547
RAP-DB (Rice) LOC_Os03g64230.1 : expressed protein
MaizeGDB (Corn) Zm00025a016280
Brachypodium KQK11971 , KQK11970 , KQK11969
Barley HORVU1Hr1G015260.1 , HORVU1Hr1G015260.3 , HORVU1Hr1G015260.2 , HORVU1Hr1G015260.5 , HORVU1Hr1G015260.4 , HORVU1Hr1G015260.7 , HORVU1Hr1G015260.6 , HORVU1Hr1G015260.9 , HORVU1Hr1G015260.8 , HORVU1Hr1G015260.33 , HORVU1Hr1G015260.32 , HORVU1Hr1G015260.31 , HORVU1Hr1G015260.30 , HORVU1Hr1G015260.36 , HORVU1Hr1G015260.35 , HORVU1Hr1G015260.34 , HORVU1Hr1G015260.20 , HORVU1Hr1G015260.21 , HORVU1Hr1G015260.22 , HORVU1Hr1G015260.24 , HORVU1Hr1G015260.25 , HORVU1Hr1G015260.26 , HORVU1Hr1G015260.27 , HORVU1Hr1G015260.28 , HORVU1Hr1G015260.29 , HORVU3Hr1G013360.16 , HORVU3Hr1G013360.17 , HORVU3Hr1G013360.14 , HORVU3Hr1G013360.15 , HORVU3Hr1G013360.12 , HORVU3Hr1G013360.13 , HORVU3Hr1G013360.10 , HORVU3Hr1G013360.11 , HORVU3Hr1G013360.18 , HORVU1Hr1G015260.15 , HORVU1Hr1G015260.14 , HORVU1Hr1G015260.17 , HORVU1Hr1G015260.16 , HORVU1Hr1G015260.11 , HORVU1Hr1G015260.10 , HORVU1Hr1G015260.13 , HORVU1Hr1G015260.12 , HORVU1Hr1G015260.19 , HORVU1Hr1G015260.18 , HORVU3Hr1G013360.5 , HORVU3Hr1G013360.6 , HORVU3Hr1G013360.1 , HORVU3Hr1G013360.2 , HORVU3Hr1G013360.3 , HORVU3Hr1G013360.8 , HORVU3Hr1G013360.9
Wheat TraesCS1A02G070900 , TraesCS1A02G070900 , TraesCS1A02G070900 , TraesCS1A02G070900 , TraesCS1A02G070900 , TraesCS3A02G073200 , TraesCS5B02G564800 , TraesCS3D02G072900 , TraesCS4A02G314800 , TraesCS1D02G073300 , TraesCS1D02G073300 , TraesCS1D02G073300 , TraesCS3B02G087300 , TraesCS3B02G087300 , TraesCS5D02G550000 , TraesCS5D02G550000 , TraesCS5D02G550000 , TraesCS5D02G550000 , TraesCS1B02G089600 , TraesCS1B02G089600 , TraesCS1B02G089600 , TraesCS1B02G089600 , TraesCS1B02G089600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254900 membrane protein, putative, expressed -
2 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.007G090472 - -
4 Sobic.003G287200 WRKY23, expressed -
5 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
6 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
7 Sobic.010G096700 leaf senescence related protein, putative, expressed -
8 Sobic.007G073000 - -
9 Sobic.001G506600 exostosin family domain containing protein, expressed -
10 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -
12 Sobic.004G193500 expressed protein -
13 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
14 Sobic.006G183900 cytochrome P450, putative, expressed -
15 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
16 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
17 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.008G133000 expressed protein -
19 Sobic.002G259100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
20 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G002800 Sobic001G002800 Sobic002G254900 Sobic002G254900 Sobic001G002800--Sobic002G254900 Sobic001G503000 Sobic001G503000 Sobic001G002800--Sobic001G503000 Sobic007G090472 Sobic007G090472 Sobic001G002800--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic001G002800--Sobic003G287200 Sobic005G107500 Sobic005G107500 Sobic001G002800--Sobic005G107500 Sobic006G209000 Sobic006G209000 Sobic001G002800--Sobic006G209000 Sobic010G096700 Sobic010G096700 Sobic001G002800--Sobic010G096700 Sobic007G073000 Sobic007G073000 Sobic001G002800--Sobic007G073000 Sobic001G506600 Sobic001G506600 Sobic001G002800--Sobic001G506600 Sobic002G254900--Sobic001G002800 Sobic002G254900--Sobic010G096700 Sobic010G180100 Sobic010G180100 Sobic002G254900--Sobic010G180100 Sobic004G047600 Sobic004G047600 Sobic002G254900--Sobic004G047600 Sobic001G360700 Sobic001G360700 Sobic002G254900--Sobic001G360700 Sobic002G254900--Sobic001G503000 Sobic002G254900--Sobic001G506600 Sobic002G254900--Sobic007G090472 Sobic002G167600 Sobic002G167600 Sobic002G254900--Sobic002G167600 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic010G028100 Sobic010G028100 Sobic007G090472--Sobic010G028100 Sobic007G090472--Sobic007G073000 Sobic001G360500 Sobic001G360500 Sobic007G090472--Sobic001G360500 Sobic007G090472--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic007G090472--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic007G090472--Sobic006G135300 Sobic006G229100 Sobic006G229100 Sobic007G090472--Sobic006G229100 Sobic007G090472--Sobic001G503000 Sobic007G090472--Sobic003G215300 Sobic006G183900 Sobic006G183900 Sobic003G287200--Sobic006G183900 Sobic003G287200--Sobic006G229100 Sobic003G287200--Sobic001G002800 Sobic003G287200--Sobic001G360500 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic003G287200--Sobic010G096700 Sobic007G170300 Sobic007G170300 Sobic003G287200--Sobic007G170300 Sobic006G117500 Sobic006G117500 Sobic003G287200--Sobic006G117500 Sobic005G107500--Sobic001G002800 Sobic005G107500--Sobic006G117500 Sobic005G107500--Sobic002G254900 Sobic008G133000 Sobic008G133000 Sobic005G107500--Sobic008G133000 Sobic005G107500--Sobic003G287200 Sobic005G089200 Sobic005G089200 Sobic005G107500--Sobic005G089200 Sobic005G107500--Sobic005G104200 Sobic005G107500--Sobic001G503000 Sobic005G107500--Sobic010G096700 Sobic007G154100 Sobic007G154100 Sobic006G209000--Sobic007G154100 Sobic006G108300 Sobic006G108300 Sobic006G209000--Sobic006G108300 Sobic005G071900 Sobic005G071900 Sobic006G209000--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic006G209000--Sobic004G312500 Sobic006G209000--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic009G106100 Sobic009G106100 Sobic006G209000--Sobic009G106100 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300 Sobic007G073000--Sobic006G092700 Sobic003G322100 Sobic003G322100 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic002G146000 Sobic002G146000 Sobic007G073000--Sobic002G146000 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G073000--Sobic007G090472 Sobic003G240400 Sobic003G240400 Sobic007G073000--Sobic003G240400 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic002G019100 Sobic002G019100 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300
Octagon: transcription factors


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