Gene annotation
Transcriptome id Sobic.001G514700.1
Synonym Sb01g048030, CYP78A9
Functional annotation Cytochrome P450, family 78,( (PubMedID : 26759170,(PubMedID : 24597475)
cytochrome P450, putative, expressed
UniProt C5WZ14
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF62
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G46660 : cytochrome P450, family 78, subfamily A, polypeptide 6
RAP-DB (Rice) LOC_Os03g04190.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a000478
Brachypodium KQK23785
Barley HORVU4Hr1G081210.4 , HORVU4Hr1G081210.5 , HORVU4Hr1G081210.1 , HORVU4Hr1G081210.2 , HORVU4Hr1G081210.3
Wheat TraesCS4D02G327400 , TraesCS4B02G330500 , TraesCS5A02G502000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
2 Sobic.010G096700 leaf senescence related protein, putative, expressed -
3 Sobic.001G506600 exostosin family domain containing protein, expressed -
4 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
5 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
6 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
7 Sobic.005G175900 expressed protein -
8 Sobic.010G070400 DNA binding protein, putative, expressed -
9 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
10 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
11 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.004G322000 hypro1, putative, expressed -
13 Sobic.002G391900 peroxidase precursor, putative, expressed -
14 Sobic.010G152500 glycosyltransferase, putative, expressed -
15 Sobic.002G115600 membrane protein, putative, expressed -
16 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.006G108300 expressed protein -
18 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
19 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
20 Sobic.003G240400 leaf senescence related protein, putative, expressed -


Gene co-expression network
sample Sobic001G514700 Sobic001G514700 Sobic003G215300 Sobic003G215300 Sobic001G514700--Sobic003G215300 Sobic010G096700 Sobic010G096700 Sobic001G514700--Sobic010G096700 Sobic001G506600 Sobic001G506600 Sobic001G514700--Sobic001G506600 Sobic001G263300 Sobic001G263300 Sobic001G514700--Sobic001G263300 Sobic006G031100 Sobic006G031100 Sobic001G514700--Sobic006G031100 Sobic001G503000 Sobic001G503000 Sobic001G514700--Sobic001G503000 Sobic005G175900 Sobic005G175900 Sobic001G514700--Sobic005G175900 Sobic010G070400 Sobic010G070400 Sobic001G514700--Sobic010G070400 Sobic002G029600 Sobic002G029600 Sobic001G514700--Sobic002G029600 Sobic007G090600 Sobic007G090600 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic006G196400 Sobic006G196400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic006G209000 Sobic006G209000 Sobic010G096700--Sobic006G209000 Sobic004G322000 Sobic004G322000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic005G115300 Sobic005G115300 Sobic010G096700--Sobic005G115300 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic002G019100 Sobic002G019100 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300 Sobic001G263300--Sobic003G240400 Sobic001G263300--Sobic005G175900 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic001G263300--Sobic007G090600 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic001G263300--Sobic006G031100 Sobic001G263300--Sobic004G322000 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic006G031100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic006G031100--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic001G503000--Sobic004G322000 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400 Sobic004G029300 Sobic004G029300 Sobic010G070400--Sobic004G029300 Sobic007G014200 Sobic007G014200 Sobic010G070400--Sobic007G014200 Sobic010G070400--Sobic003G215300 Sobic004G271800 Sobic004G271800 Sobic010G070400--Sobic004G271800 Sobic010G070400--Sobic005G175900 Sobic003G000100 Sobic003G000100 Sobic010G070400--Sobic003G000100 Sobic001G277500 Sobic001G277500 Sobic010G070400--Sobic001G277500 Sobic010G070400--Sobic007G090600 Sobic003G183300 Sobic003G183300 Sobic010G070400--Sobic003G183300 Sobic003G079100 Sobic003G079100 Sobic002G029600--Sobic003G079100 Sobic002G029600--Sobic006G031100 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic002G029600--Sobic005G065700 Sobic010G152500 Sobic010G152500 Sobic002G029600--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic002G029600--Sobic005G071900 Sobic002G029600--Sobic007G090600 Sobic002G029600--Sobic001G506600
Octagon: transcription factors


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