Gene annotation
Transcriptome id Sobic.006G224500.1
Synonym Sb06g029370
Functional annotation peroxidase precursor, putative, expressed
UniProt C5YGI9
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF80
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G11290 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os04g53640.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018141 , Zm00025a009506 , Zm00025a057083 , Zm00025a044120
Brachypodium KQJ84765 , KQK05559 , KQK05560
Barley HORVU2Hr1G018550.5 , HORVU2Hr1G018550.4 , HORVU2Hr1G018550.3 , HORVU2Hr1G018550.2 , HORVU2Hr1G018550.1 , HORVU7Hr1G018530.1 , HORVU7Hr1G018530.2 , HORVU7Hr1G018530.3 , HORVU1Hr1G020800.1 , HORVU1Hr1G020800.2 , HORVU2Hr1G107350.14 , HORVU2Hr1G107350.15 , HORVU2Hr1G018530.1 , HORVU2Hr1G018530.3 , HORVU2Hr1G018530.2 , HORVU2Hr1G018530.4 , HORVU5Hr1G066710.1
Wheat TraesCS2B02G499900 , TraesCS2B02G499900 , TraesCS1D02G096200 , TraesCS5A02G550600 , TraesCS1B02G115700 , TraesCS1A02G104100 , TraesCS5A02G550400 , TraesCS5A02G550500 , TraesCS1B02G115000 , TraesCS5A02G550300 , TraesCS2A02G476300 , TraesCS2A02G476300
Populus PNT46794


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G152500 glycosyltransferase, putative, expressed -
2 Sobic.002G391900 peroxidase precursor, putative, expressed -
3 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
4 Sobic.003G382200 methyltransferase domain containing protein, expressed -
5 Sobic.005G216600 plant protein of unknown function domain containing protein, expressed -
6 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
7 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
8 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
9 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
10 Sobic.005G182800 NB-ARC domain containing protein, expressed -
11 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
12 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
13 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
14 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
15 Sobic.003G255600 expressed protein -
16 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
17 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
20 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic006G224500 Sobic006G224500 Sobic010G152500 Sobic010G152500 Sobic006G224500--Sobic010G152500 Sobic002G391900 Sobic002G391900 Sobic006G224500--Sobic002G391900 Sobic004G009200 Sobic004G009200 Sobic006G224500--Sobic004G009200 Sobic003G382200 Sobic003G382200 Sobic006G224500--Sobic003G382200 Sobic005G216600 Sobic005G216600 Sobic006G224500--Sobic005G216600 Sobic006G031100 Sobic006G031100 Sobic006G224500--Sobic006G031100 Sobic006G097900 Sobic006G097900 Sobic006G224500--Sobic006G097900 Sobic006G085700 Sobic006G085700 Sobic006G224500--Sobic006G085700 Sobic002G146000 Sobic002G146000 Sobic006G224500--Sobic002G146000 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic010G152500--Sobic002G391900 Sobic007G015100 Sobic007G015100 Sobic010G152500--Sobic007G015100 Sobic009G106100 Sobic009G106100 Sobic010G152500--Sobic009G106100 Sobic005G106300 Sobic005G106300 Sobic010G152500--Sobic005G106300 Sobic002G029500 Sobic002G029500 Sobic010G152500--Sobic002G029500 Sobic010G152500--Sobic006G097900 Sobic005G182900 Sobic005G182900 Sobic010G152500--Sobic005G182900 Sobic002G391900--Sobic003G382200 Sobic002G391900--Sobic010G152500 Sobic002G391900--Sobic004G009200 Sobic002G391900--Sobic009G106100 Sobic005G069500 Sobic005G069500 Sobic002G391900--Sobic005G069500 Sobic002G391900--Sobic006G097900 Sobic002G391900--Sobic005G216600 Sobic002G391900--Sobic006G031100 Sobic002G391900--Sobic006G224500 Sobic005G197400 Sobic005G197400 Sobic004G009200--Sobic005G197400 Sobic004G009200--Sobic010G152500 Sobic005G197500 Sobic005G197500 Sobic004G009200--Sobic005G197500 Sobic004G009200--Sobic003G382200 Sobic004G009200--Sobic009G106100 Sobic004G009200--Sobic005G106300 Sobic007G154100 Sobic007G154100 Sobic004G009200--Sobic007G154100 Sobic005G182800 Sobic005G182800 Sobic004G009200--Sobic005G182800 Sobic004G009200--Sobic007G015100 Sobic003G382200--Sobic010G152500 Sobic003G382200--Sobic002G391900 Sobic003G382200--Sobic004G009200 Sobic003G382200--Sobic009G106100 Sobic003G382200--Sobic005G216600 Sobic001G274400 Sobic001G274400 Sobic003G382200--Sobic001G274400 Sobic003G382200--Sobic005G106300 Sobic003G382200--Sobic005G182900 Sobic003G382200--Sobic005G197400 Sobic005G216600--Sobic006G097900 Sobic010G268700 Sobic010G268700 Sobic005G216600--Sobic010G268700 Sobic005G216600--Sobic005G182900 Sobic008G033100 Sobic008G033100 Sobic005G216600--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G216600--Sobic010G242800 Sobic003G161400 Sobic003G161400 Sobic005G216600--Sobic003G161400 Sobic005G216600--Sobic005G182800 Sobic001G293100 Sobic001G293100 Sobic005G216600--Sobic001G293100 Sobic004G121600 Sobic004G121600 Sobic005G216600--Sobic004G121600 Sobic007G090600 Sobic007G090600 Sobic006G031100--Sobic007G090600 Sobic003G215300 Sobic003G215300 Sobic006G031100--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic006G031100--Sobic006G196400 Sobic002G029600 Sobic002G029600 Sobic006G031100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic006G031100--Sobic004G014600 Sobic006G031100--Sobic005G182800 Sobic006G031100--Sobic006G085700 Sobic004G322000 Sobic004G322000 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700 Sobic006G097900--Sobic004G121600 Sobic006G097900--Sobic010G268700 Sobic003G441700 Sobic003G441700 Sobic006G097900--Sobic003G441700 Sobic001G181600 Sobic001G181600 Sobic006G097900--Sobic001G181600 Sobic001G218400 Sobic001G218400 Sobic006G097900--Sobic001G218400 Sobic006G097900--Sobic005G216600 Sobic006G097900--Sobic001G293100 Sobic003G441800 Sobic003G441800 Sobic006G097900--Sobic003G441800 Sobic005G119900 Sobic005G119900 Sobic006G097900--Sobic005G119900 Sobic003G282300 Sobic003G282300 Sobic006G085700--Sobic003G282300 Sobic006G085700--Sobic006G031100 Sobic006G085700--Sobic007G090600 Sobic006G085700--Sobic002G146000 Sobic006G085700--Sobic004G014600 Sobic003G140200 Sobic003G140200 Sobic006G085700--Sobic003G140200 Sobic006G085700--Sobic003G441800 Sobic006G085700--Sobic005G182800 Sobic006G085700--Sobic010G152500 Sobic007G073000 Sobic007G073000 Sobic002G146000--Sobic007G073000 Sobic006G092700 Sobic006G092700 Sobic002G146000--Sobic006G092700 Sobic007G037600 Sobic007G037600 Sobic002G146000--Sobic007G037600 Sobic003G353200 Sobic003G353200 Sobic002G146000--Sobic003G353200 Sobic003G000100 Sobic003G000100 Sobic002G146000--Sobic003G000100 Sobic002G146000--Sobic006G085700 Sobic010G031700 Sobic010G031700 Sobic002G146000--Sobic010G031700 Sobic002G146000--Sobic003G215300 Sobic004G106100 Sobic004G106100 Sobic002G146000--Sobic004G106100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.