Gene annotation
Transcriptome id Sobic.010G070400.3,Sobic.010G070400.2,Sobic.010G070400.4
Synonym
Functional annotation DNA binding protein, putative, expressed
UniProt A0A1W0VRS8
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G68380 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os01g04220.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a035572
Brachypodium -
Barley -
Wheat TraesCS3D02G043100 , TraesCS3D02G043200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G029300 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
2 Sobic.007G014200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
4 Sobic.004G271800 WRKY66, expressed -
5 Sobic.005G175900 expressed protein -
6 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
7 Sobic.001G277500 TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
9 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
11 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.006G019700 transferase family protein, putative, expressed -
13 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
15 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
16 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
17 Sobic.006G196400 U-box, putative, expressed -
18 Sobic.002G183750 - -
19 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
20 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase


Gene co-expression network
sample Sobic010G070400 Sobic010G070400 Sobic004G029300 Sobic004G029300 Sobic010G070400--Sobic004G029300 Sobic007G014200 Sobic007G014200 Sobic010G070400--Sobic007G014200 Sobic003G215300 Sobic003G215300 Sobic010G070400--Sobic003G215300 Sobic004G271800 Sobic004G271800 Sobic010G070400--Sobic004G271800 Sobic005G175900 Sobic005G175900 Sobic010G070400--Sobic005G175900 Sobic003G000100 Sobic003G000100 Sobic010G070400--Sobic003G000100 Sobic001G277500 Sobic001G277500 Sobic010G070400--Sobic001G277500 Sobic007G090600 Sobic007G090600 Sobic010G070400--Sobic007G090600 Sobic003G183300 Sobic003G183300 Sobic010G070400--Sobic003G183300 Sobic004G029300--Sobic010G070400 Sobic004G029300--Sobic003G000100 Sobic003G257400 Sobic003G257400 Sobic004G029300--Sobic003G257400 Sobic001G507100 Sobic001G507100 Sobic004G029300--Sobic001G507100 Sobic001G218400 Sobic001G218400 Sobic004G029300--Sobic001G218400 Sobic004G106100 Sobic004G106100 Sobic004G029300--Sobic004G106100 Sobic005G217766 Sobic005G217766 Sobic004G029300--Sobic005G217766 Sobic004G119800 Sobic004G119800 Sobic004G029300--Sobic004G119800 Sobic010G191600 Sobic010G191600 Sobic004G029300--Sobic010G191600 Sobic007G014200--Sobic010G070400 Sobic007G014200--Sobic005G175900 Sobic007G014200--Sobic001G277500 Sobic001G263300 Sobic001G263300 Sobic007G014200--Sobic001G263300 Sobic006G031100 Sobic006G031100 Sobic007G014200--Sobic006G031100 Sobic007G014200--Sobic003G215300 Sobic007G014200--Sobic010G191600 Sobic007G014200--Sobic004G106100 Sobic007G014200--Sobic007G090600 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic006G196400 Sobic006G196400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic004G271800--Sobic003G000100 Sobic004G271800--Sobic003G240400 Sobic010G152400 Sobic010G152400 Sobic004G271800--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G271800--Sobic004G322100 Sobic006G019700 Sobic006G019700 Sobic004G271800--Sobic006G019700 Sobic006G092700 Sobic006G092700 Sobic004G271800--Sobic006G092700 Sobic004G271800--Sobic003G215300 Sobic008G035800 Sobic008G035800 Sobic004G271800--Sobic008G035800 Sobic004G271800--Sobic004G106100 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic010G082000 Sobic010G082000 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic004G306900 Sobic004G306900 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic010G028100 Sobic010G028100 Sobic001G277500--Sobic010G028100 Sobic001G277500--Sobic010G070400 Sobic001G277500--Sobic003G000100 Sobic001G277500--Sobic010G082000 Sobic001G277500--Sobic006G092700 Sobic001G277500--Sobic007G014200 Sobic001G277500--Sobic006G031100 Sobic006G003600 Sobic006G003600 Sobic001G277500--Sobic006G003600 Sobic001G277500--Sobic006G196400 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic004G322000 Sobic004G322000 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic004G014600 Sobic004G014600 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic006G205700 Sobic006G205700 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic007G090600--Sobic002G115600 Sobic003G183300--Sobic004G271800 Sobic002G146000 Sobic002G146000 Sobic003G183300--Sobic002G146000 Sobic003G183300--Sobic003G000100 Sobic003G183300--Sobic010G028100 Sobic003G183300--Sobic006G003100 Sobic003G183300--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic003G183300--Sobic006G135300 Sobic008G135300 Sobic008G135300 Sobic003G183300--Sobic008G135300 Sobic003G183300--Sobic010G070400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.