Gene annotation
Transcriptome id Sobic.001G149400.1
Synonym Sb01g012990
Functional annotation ankyrin repeat domain-containing protein 50, putative, expressed
UniProt C5WQH4
Pfam PF00635 PF13857 PF13637 PF12796
Panther DB PTHR24198 PTHR24198:SF85
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07710 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os03g45290.1 : ankyrin repeat domain-containing protein 50, putative, expressed
MaizeGDB (Corn) Zm00025a017210 , Zm00025a007565
Brachypodium -
Barley HORVU4Hr1G002180.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
2 Sobic.006G135300 expressed protein -
3 Sobic.005G115300 expressed protein -
4 Sobic.006G019700 transferase family protein, putative, expressed -
5 Sobic.007G090472 - -
6 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
7 Sobic.005G175900 expressed protein -
8 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
9 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
11 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.006G196400 U-box, putative, expressed -
13 Sobic.010G070400 DNA binding protein, putative, expressed -
14 Sobic.004G322000 hypro1, putative, expressed -
15 Sobic.006G229100 receptor-like kinase, putative, expressed -
16 Sobic.006G003600 transporter family protein, putative, expressed -
17 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
18 Sobic.004G271800 WRKY66, expressed -
19 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
20 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase


Gene co-expression network
sample Sobic001G149400 Sobic001G149400 Sobic010G082000 Sobic010G082000 Sobic001G149400--Sobic010G082000 Sobic006G135300 Sobic006G135300 Sobic001G149400--Sobic006G135300 Sobic005G115300 Sobic005G115300 Sobic001G149400--Sobic005G115300 Sobic006G019700 Sobic006G019700 Sobic001G149400--Sobic006G019700 Sobic007G090472 Sobic007G090472 Sobic001G149400--Sobic007G090472 Sobic009G259800 Sobic009G259800 Sobic001G149400--Sobic009G259800 Sobic005G175900 Sobic005G175900 Sobic001G149400--Sobic005G175900 Sobic003G215300 Sobic003G215300 Sobic001G149400--Sobic003G215300 Sobic006G092700 Sobic006G092700 Sobic001G149400--Sobic006G092700 Sobic010G082000--Sobic006G092700 Sobic003G240400 Sobic003G240400 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G152400 Sobic010G152400 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic007G073000 Sobic007G073000 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic010G028100 Sobic010G028100 Sobic006G135300--Sobic010G028100 Sobic006G135300--Sobic006G019700 Sobic006G135300--Sobic010G152400 Sobic003G322100 Sobic003G322100 Sobic006G135300--Sobic003G322100 Sobic004G306900 Sobic004G306900 Sobic006G135300--Sobic004G306900 Sobic002G146000 Sobic002G146000 Sobic006G135300--Sobic002G146000 Sobic001G503000 Sobic001G503000 Sobic005G115300--Sobic001G503000 Sobic004G312200 Sobic004G312200 Sobic005G115300--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic005G115300--Sobic004G248500 Sobic005G104200 Sobic005G104200 Sobic005G115300--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic001G348800 Sobic001G348800 Sobic005G115300--Sobic001G348800 Sobic010G096700 Sobic010G096700 Sobic005G115300--Sobic010G096700 Sobic005G115300--Sobic010G082000 Sobic006G019700--Sobic004G306900 Sobic003G182200 Sobic003G182200 Sobic006G019700--Sobic003G182200 Sobic006G019700--Sobic006G028500 Sobic004G322100 Sobic004G322100 Sobic006G019700--Sobic004G322100 Sobic006G019700--Sobic010G082000 Sobic006G019700--Sobic006G092700 Sobic006G019700--Sobic010G152400 Sobic006G019700--Sobic006G135300 Sobic003G000100 Sobic003G000100 Sobic006G019700--Sobic003G000100 Sobic007G090472--Sobic010G028100 Sobic007G090472--Sobic007G073000 Sobic001G360500 Sobic001G360500 Sobic007G090472--Sobic001G360500 Sobic007G090472--Sobic010G082000 Sobic007G090472--Sobic006G092700 Sobic007G090472--Sobic006G135300 Sobic007G090472--Sobic006G229100 Sobic007G090472--Sobic001G503000 Sobic007G090472--Sobic003G215300 Sobic005G080600 Sobic005G080600 Sobic009G259800--Sobic005G080600 Sobic003G185300 Sobic003G185300 Sobic009G259800--Sobic003G185300 Sobic007G206800 Sobic007G206800 Sobic009G259800--Sobic007G206800 Sobic009G259800--Sobic006G019700 Sobic007G100700 Sobic007G100700 Sobic009G259800--Sobic007G100700 Sobic009G259800--Sobic006G196400 Sobic002G068000 Sobic002G068000 Sobic009G259800--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic009G259800--Sobic010G234500 Sobic003G426500 Sobic003G426500 Sobic009G259800--Sobic003G426500 Sobic001G263300 Sobic001G263300 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic002G115600 Sobic002G115600 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic007G090600 Sobic007G090600 Sobic005G175900--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic003G215300--Sobic007G073000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G092700--Sobic006G019700
Octagon: transcription factors


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