Gene annotation
Transcriptome id Sobic.004G312200.1
Synonym ATWRKY9, WRKY9, Sb04g034440
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence (PubMedID : 27586543)
WRKY32, expressed
UniProt C5XSY1
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G68150 : WRKY DNA-binding protein 9
RAP-DB (Rice) LOC_Os02g53100.1 : WRKY32, expressed
MaizeGDB (Corn) Zm00025a022253
Brachypodium KQK01708 , KQK01707 , PNT69558
Barley HORVU3Hr1G033740.12 , HORVU3Hr1G033740.11 , HORVU3Hr1G020210.2 , HORVU3Hr1G020210.3 , HORVU3Hr1G020210.1 , HORVU3Hr1G020210.4 , HORVU6Hr1G079710.1 , HORVU6Hr1G079710.2 , HORVU3Hr1G033740.2 , HORVU3Hr1G033740.3 , HORVU3Hr1G033740.6 , HORVU3Hr1G033740.7 , HORVU3Hr1G033740.8
Wheat TraesCS6A02G326500 , TraesCS6A02G326500 , TraesCS4A02G396400 , TraesCS4A02G396400 , TraesCS3D02G173300 , TraesCS6B02G357600 , TraesCS3B02G199000 , TraesCS6D02G306300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G115300 expressed protein -
2 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.006G196400 U-box, putative, expressed -
4 Sobic.005G175900 expressed protein -
5 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
6 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
7 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
8 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
9 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
10 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.004G322000 hypro1, putative, expressed -
12 Sobic.001G218500 MATH domain containing protein, expressed -
13 Sobic.003G240400 leaf senescence related protein, putative, expressed -
14 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G115600 membrane protein, putative, expressed -
16 Sobic.006G229100 receptor-like kinase, putative, expressed -
17 Sobic.007G090472 - -
18 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
19 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
20 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein


Gene co-expression network
sample Sobic004G312200 Sobic004G312200 Sobic005G115300 Sobic005G115300 Sobic004G312200--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic004G312200--Sobic001G503000 Sobic006G196400 Sobic006G196400 Sobic004G312200--Sobic006G196400 Sobic005G175900 Sobic005G175900 Sobic004G312200--Sobic005G175900 Sobic010G082000 Sobic010G082000 Sobic004G312200--Sobic010G082000 Sobic003G185300 Sobic003G185300 Sobic004G312200--Sobic003G185300 Sobic001G263300 Sobic001G263300 Sobic004G312200--Sobic001G263300 Sobic003G215300 Sobic003G215300 Sobic004G312200--Sobic003G215300 Sobic001G149400 Sobic001G149400 Sobic004G312200--Sobic001G149400 Sobic005G115300--Sobic001G503000 Sobic005G115300--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic005G115300--Sobic004G248500 Sobic005G104200 Sobic005G104200 Sobic005G115300--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic001G348800 Sobic001G348800 Sobic005G115300--Sobic001G348800 Sobic010G096700 Sobic010G096700 Sobic005G115300--Sobic010G096700 Sobic005G115300--Sobic010G082000 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic006G031100 Sobic006G031100 Sobic006G196400--Sobic006G031100 Sobic007G090600 Sobic007G090600 Sobic006G196400--Sobic007G090600 Sobic005G080600 Sobic005G080600 Sobic006G196400--Sobic005G080600 Sobic003G240400 Sobic003G240400 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic002G115600 Sobic002G115600 Sobic006G196400--Sobic002G115600 Sobic006G196400--Sobic005G175900 Sobic006G196400--Sobic010G082000 Sobic006G205700 Sobic006G205700 Sobic006G196400--Sobic006G205700 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400 Sobic006G092700 Sobic006G092700 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic006G135300 Sobic006G135300 Sobic010G082000--Sobic006G135300 Sobic010G152400 Sobic010G152400 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic006G019700 Sobic006G019700 Sobic010G082000--Sobic006G019700 Sobic007G073000 Sobic007G073000 Sobic010G082000--Sobic007G073000 Sobic010G082000--Sobic006G196400 Sobic009G259800 Sobic009G259800 Sobic003G185300--Sobic009G259800 Sobic002G068000 Sobic002G068000 Sobic003G185300--Sobic002G068000 Sobic009G032900 Sobic009G032900 Sobic003G185300--Sobic009G032900 Sobic010G158400 Sobic010G158400 Sobic003G185300--Sobic010G158400 Sobic003G185300--Sobic005G080600 Sobic003G426500 Sobic003G426500 Sobic003G185300--Sobic003G426500 Sobic005G216500 Sobic005G216500 Sobic003G185300--Sobic005G216500 Sobic003G269900 Sobic003G269900 Sobic003G185300--Sobic003G269900 Sobic003G185300--Sobic005G115300 Sobic001G263300--Sobic003G240400 Sobic001G263300--Sobic005G175900 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic001G263300--Sobic007G090600 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic001G263300--Sobic006G031100 Sobic001G263300--Sobic004G322000 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic003G215300--Sobic007G073000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic001G149400--Sobic010G082000 Sobic001G149400--Sobic006G135300 Sobic001G149400--Sobic005G115300 Sobic001G149400--Sobic006G019700 Sobic007G090472 Sobic007G090472 Sobic001G149400--Sobic007G090472 Sobic001G149400--Sobic009G259800 Sobic001G149400--Sobic005G175900 Sobic001G149400--Sobic003G215300 Sobic001G149400--Sobic006G092700
Octagon: transcription factors


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