Gene annotation
Transcriptome id Sobic.006G229100.4,Sobic.006G229100.2,Sobic.006G229100.1
Synonym RK3, ARK3
Functional annotation receptor-like kinase, putative, expressed
UniProt A0A1Z5RFC4 , A0A1Z5RF78 , A0A1Z5RGB4
Pfam PF08276 PF00954 PF01453 PF08276 PF00954 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF87
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0580Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : S-locus lectin protein kinase family protein,receptor kinase 3
RAP-DB (Rice) LOC_Os04g54070.1 : receptor-like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a009644 , Zm00025a009642 , Zm00025a057124 , Zm00025a057135 , Zm00025a057136 , Zm00025a057121
Brachypodium KQJ92829 , KQK14050 , PNT61921 , KQJ84800 , KQJ92830 , PNT65692 , PNT61937 , PNT61934
Barley HORVU2Hr1G117790.2 , HORVU2Hr1G117790.1 , HORVU2Hr1G117360.2 , HORVU2Hr1G117360.3 , HORVU2Hr1G117360.1 , HORVU2Hr1G117360.6 , HORVU2Hr1G117360.4 , HORVU2Hr1G117360.5 , HORVU2Hr1G117360.8 , HORVU2Hr1G117800.3 , HORVU2Hr1G117800.2 , HORVU2Hr1G117800.1 , HORVU2Hr1G117360.25 , HORVU2Hr1G117360.27 , HORVU2Hr1G117360.26 , HORVU2Hr1G117360.21 , HORVU2Hr1G117360.20 , HORVU2Hr1G117360.23 , HORVU2Hr1G117360.22 , HORVU2Hr1G117360.28 , HORVU2Hr1G117870.2 , HORVU2Hr1G117870.3 , HORVU2Hr1G117870.1 , HORVU2Hr1G117870.6 , HORVU2Hr1G117870.7 , HORVU2Hr1G117870.4 , HORVU2Hr1G117870.5 , HORVU2Hr1G117870.8 , HORVU2Hr1G117360.10 , HORVU2Hr1G117360.11 , HORVU2Hr1G117360.12 , HORVU2Hr1G117360.14 , HORVU2Hr1G117360.15 , HORVU2Hr1G117360.16 , HORVU2Hr1G117360.17 , HORVU2Hr1G117360.18 , HORVU2Hr1G117360.19
Wheat TraesCS2B02G511300 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G537900 , TraesCS2B02G510900 , TraesCS2B02G510900 , TraesCS2B02G510900 , TraesCS2B02G510900 , TraesCS2B02G511200 , TraesCS2D02G538400 , TraesCS2B02G510900 , TraesCS2B02G512400 , TraesCS2A02G484800 , TraesCS2A02G484800 , TraesCS2A02G484800 , TraesCS2B02G568500 , TraesCS2B02G512200 , TraesCS5A02G352000 , TraesCS2D02G538900 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS2A02G538100 , TraesCS2A02G485700 , TraesCS2A02G485700 , TraesCS2D02G536900 , TraesCS2D02G536900 , TraesCS2D02G536900 , TraesCS2B02G566100 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G568600 , TraesCS2A02G484800 , TraesCS2B02G567700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G090472 - -
2 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
3 Sobic.005G115300 expressed protein -
4 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.003G287200 WRKY23, expressed -
7 Sobic.010G096700 leaf senescence related protein, putative, expressed -
8 Sobic.006G135300 expressed protein -
9 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
10 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
11 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
12 Sobic.007G073000 - -
13 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
14 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.004G322000 hypro1, putative, expressed -
16 Sobic.006G183900 cytochrome P450, putative, expressed -
17 Sobic.006G003600 transporter family protein, putative, expressed -
18 Sobic.001G506600 exostosin family domain containing protein, expressed -
19 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
20 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase


Gene co-expression network
sample Sobic006G229100 Sobic006G229100 Sobic007G090472 Sobic007G090472 Sobic006G229100--Sobic007G090472 Sobic010G082000 Sobic010G082000 Sobic006G229100--Sobic010G082000 Sobic005G115300 Sobic005G115300 Sobic006G229100--Sobic005G115300 Sobic001G360500 Sobic001G360500 Sobic006G229100--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic006G229100--Sobic001G503000 Sobic003G287200 Sobic003G287200 Sobic006G229100--Sobic003G287200 Sobic010G096700 Sobic010G096700 Sobic006G229100--Sobic010G096700 Sobic006G135300 Sobic006G135300 Sobic006G229100--Sobic006G135300 Sobic001G149400 Sobic001G149400 Sobic006G229100--Sobic001G149400 Sobic010G028100 Sobic010G028100 Sobic007G090472--Sobic010G028100 Sobic007G073000 Sobic007G073000 Sobic007G090472--Sobic007G073000 Sobic007G090472--Sobic001G360500 Sobic007G090472--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic007G090472--Sobic006G092700 Sobic007G090472--Sobic006G135300 Sobic007G090472--Sobic006G229100 Sobic007G090472--Sobic001G503000 Sobic003G215300 Sobic003G215300 Sobic007G090472--Sobic003G215300 Sobic010G082000--Sobic006G092700 Sobic003G240400 Sobic003G240400 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G152400 Sobic010G152400 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic006G019700 Sobic006G019700 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic005G115300--Sobic001G503000 Sobic004G312200 Sobic004G312200 Sobic005G115300--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic005G115300--Sobic004G248500 Sobic005G104200 Sobic005G104200 Sobic005G115300--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic005G115300--Sobic001G506600 Sobic005G115300--Sobic006G229100 Sobic001G348800 Sobic001G348800 Sobic005G115300--Sobic001G348800 Sobic005G115300--Sobic010G096700 Sobic005G115300--Sobic010G082000 Sobic001G360500--Sobic007G090472 Sobic001G360500--Sobic010G082000 Sobic001G360500--Sobic007G073000 Sobic002G101400 Sobic002G101400 Sobic001G360500--Sobic002G101400 Sobic007G057400 Sobic007G057400 Sobic001G360500--Sobic007G057400 Sobic001G360500--Sobic006G092700 Sobic001G360500--Sobic006G229100 Sobic006G003600 Sobic006G003600 Sobic001G360500--Sobic006G003600 Sobic003G322100 Sobic003G322100 Sobic001G360500--Sobic003G322100 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic006G183900 Sobic006G183900 Sobic003G287200--Sobic006G183900 Sobic003G287200--Sobic006G229100 Sobic001G002800 Sobic001G002800 Sobic003G287200--Sobic001G002800 Sobic003G287200--Sobic001G360500 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic003G287200--Sobic010G096700 Sobic007G170300 Sobic007G170300 Sobic003G287200--Sobic007G170300 Sobic006G117500 Sobic006G117500 Sobic003G287200--Sobic006G117500 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic006G135300--Sobic010G028100 Sobic006G135300--Sobic006G019700 Sobic006G135300--Sobic010G152400 Sobic006G135300--Sobic003G322100 Sobic004G306900 Sobic004G306900 Sobic006G135300--Sobic004G306900 Sobic002G146000 Sobic002G146000 Sobic006G135300--Sobic002G146000 Sobic001G149400--Sobic010G082000 Sobic001G149400--Sobic006G135300 Sobic001G149400--Sobic005G115300 Sobic001G149400--Sobic006G019700 Sobic001G149400--Sobic007G090472 Sobic009G259800 Sobic009G259800 Sobic001G149400--Sobic009G259800 Sobic005G175900 Sobic005G175900 Sobic001G149400--Sobic005G175900 Sobic001G149400--Sobic003G215300 Sobic001G149400--Sobic006G092700
Octagon: transcription factors


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