Gene annotation
| Transcriptome id | Sobic.006G183900.1 |
|---|---|
| Synonym | Sb06g025820, CYP87A2 |
| Functional annotation | cytochrome P450, putative, expressed |
| UniProt | C5YE41 |
| Pfam | PF00067 |
| Panther DB | PTHR24286 PTHR24286:SF87 |
| NCBI CDD | KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT1G12740 : cytochrome P450, family 87, subfamily A, polypeptide 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g48170.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | Zm00025a056765 , Zm00025a010167 |
| Brachypodium | PNT69227 , PNT69226 , KQJ84113 , KQK00746 |
| Barley | HORVU6Hr1G065340.11 , HORVU2Hr1G095130.12 , HORVU2Hr1G095130.8 , HORVU2Hr1G095130.9 , HORVU2Hr1G095130.6 , HORVU2Hr1G095130.7 , HORVU2Hr1G095130.4 , HORVU2Hr1G095130.5 , HORVU2Hr1G095130.2 , HORVU2Hr1G095130.3 , HORVU2Hr1G095130.1 , HORVU2Hr1G095130.11 , HORVU2Hr1G095130.13 , HORVU6Hr1G065340.10 , HORVU6Hr1G065340.12 , HORVU6Hr1G065340.6 , HORVU6Hr1G065340.7 , HORVU6Hr1G065340.4 , HORVU6Hr1G065340.5 , HORVU6Hr1G065340.2 , HORVU6Hr1G065340.3 , HORVU6Hr1G065340.1 , HORVU6Hr1G065340.8 , HORVU6Hr1G065340.9 |
| Wheat | TraesCS2B02G418700 , TraesCS2A02G400600 , TraesCS6B02G269500 , TraesCS2D02G398200 , TraesCS6A02G255900 , TraesCS6D02G237100 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G287200 | WRKY23, expressed | - |
| 2 | Sobic.007G109600 | expressed protein | - |
| 3 | Sobic.006G028400 | 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed | - |
| 4 | Sobic.007G090472 | - | - |
| 5 | Sobic.008G034700 | phytosulfokines precursor, putative, expressed | - |
| 6 | Sobic.004G248500 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 7 | Sobic.007G170300 | beta,beta-carotene 9,10-dioxygenase, putative, expressed | K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase |
| 8 | Sobic.002G365600 | igA FC receptor precursor, putative, expressed | - |
| 9 | Sobic.002G365500 | igA FC receptor precursor, putative, expressed | - |
| 10 | Sobic.001G360500 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 11 | Sobic.010G096400 | proteins of unknown function domain containing protein, expressed | - |
| 12 | Sobic.006G229100 | receptor-like kinase, putative, expressed | - |
| 13 | Sobic.005G046700 | LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 14 | Sobic.001G503000 | "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed | - |
| 15 | Sobic.002G185800 | transporter, putative, expressed | - |
| 16 | Sobic.002G216100 | cytochrome P450, putative, expressed | - |
| 17 | Sobic.002G404100 | annexin, putative, expressed | - |
| 18 | Sobic.003G203600 | aldehyde dehydrogenase, putative, expressed | K12355: coniferyl-aldehyde dehydrogenase |
| 19 | Sobic.002G365550 | - | - |
| 20 | Sobic.003G269500 | "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@SbMAX1a (cytochrome P450 711A enzyme in sorghum) synthesized 18-hydroxy-carlactonoic acid (18-hydroxy-CLA) directly from carlactone (CL)(PubMedID : 34970291)@cytochrome P450, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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