Gene annotation
Transcriptome id Sobic.002G185800.1
Synonym Sb02g023380
Functional annotation transporter, putative, expressed
UniProt C5XBC5
Pfam PF00083
Panther DB PTHR23505 PTHR23505:SF11
NCBI CDD KOG1330; Sugar transporter/spinster transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G10190 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os09g20500.1 : transporter, putative, expressed
MaizeGDB (Corn) Zm00025a046735 , Zm00025a046734 , Zm00025a046731 , Zm00025a046733 , Zm00025a046728 , Zm00025a046726 , Zm00025a006070
Brachypodium PNT68072 , KQJ90042 , PNT64471 , PNT64470 , KQJ90038 , KQJ90039
Barley HORVU1Hr1G083330.4 , HORVU1Hr1G083330.5 , HORVU1Hr1G083330.6 , HORVU1Hr1G083330.7 , HORVU1Hr1G083330.1 , HORVU1Hr1G083330.8 , HORVU5Hr1G058070.4 , HORVU5Hr1G058070.2 , HORVU5Hr1G058070.1 , HORVU5Hr1G058020.4 , HORVU5Hr1G058020.5 , HORVU5Hr1G058020.6 , HORVU5Hr1G058020.7 , HORVU5Hr1G058020.1 , HORVU5Hr1G058020.2 , HORVU5Hr1G058020.3 , HORVU5Hr1G058060.1 , HORVU5Hr1G058060.2 , HORVU5Hr1G058060.3 , HORVU5Hr1G058060.4 , HORVU5Hr1G058060.5
Wheat TraesCS5A02G189400 , TraesCS1D02G382400 , TraesCS1B02G395400 , TraesCS5B02G193800 , TraesCS5D02G201600 , TraesCS5B02G193700 , TraesCS5A02G189500 , TraesCS5D02G201500 , TraesCS5B02G194100 , TraesCS5D02G201400 , TraesCS1A02G375200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
3 Sobic.002G216100 cytochrome P450, putative, expressed -
4 Sobic.006G197100 DNA binding protein, putative, expressed -
5 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
6 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
7 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
9 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
12 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
13 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
14 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.007G165400 DNA binding protein, putative, expressed -
16 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
17 Sobic.002G326500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
19 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
20 Sobic.002G404100 annexin, putative, expressed -


Gene co-expression network
sample Sobic002G185800 Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic007G176000 Sobic007G176000 Sobic002G185800--Sobic007G176000 Sobic005G046700--Sobic002G185800 Sobic002G101400 Sobic002G101400 Sobic005G046700--Sobic002G101400 Sobic007G170300 Sobic007G170300 Sobic005G046700--Sobic007G170300 Sobic005G046700--Sobic007G178900 Sobic005G046700--Sobic002G216100 Sobic005G046700--Sobic007G176100 Sobic002G404100 Sobic002G404100 Sobic005G046700--Sobic002G404100 Sobic005G046700--Sobic007G176000 Sobic005G046700--Sobic004G139300 Sobic004G139300--Sobic002G216100 Sobic002G042200 Sobic002G042200 Sobic004G139300--Sobic002G042200 Sobic002G001700 Sobic002G001700 Sobic004G139300--Sobic002G001700 Sobic004G139300--Sobic002G185800 Sobic010G096400 Sobic010G096400 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic004G139300--Sobic007G178900 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600 Sobic002G216100--Sobic004G139300 Sobic002G216100--Sobic002G404100 Sobic002G216100--Sobic007G178900 Sobic010G113100 Sobic010G113100 Sobic002G216100--Sobic010G113100 Sobic002G216100--Sobic007G176000 Sobic002G216100--Sobic002G185800 Sobic001G360500 Sobic001G360500 Sobic002G216100--Sobic001G360500 Sobic002G216100--Sobic005G046700 Sobic002G216100--Sobic002G042200 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G197100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic001G264000--Sobic006G197100 Sobic004G348800 Sobic004G348800 Sobic001G264000--Sobic004G348800 Sobic001G264000--Sobic004G042000 Sobic001G264000--Sobic002G185800 Sobic009G035300 Sobic009G035300 Sobic001G264000--Sobic009G035300 Sobic001G264000--Sobic006G256900 Sobic004G249000 Sobic004G249000 Sobic001G264000--Sobic004G249000 Sobic003G269600 Sobic003G269600 Sobic001G264000--Sobic003G269600 Sobic001G264000--Sobic002G003800 Sobic007G178900--Sobic007G176000 Sobic007G178900--Sobic002G216100 Sobic007G178900--Sobic004G139300 Sobic007G178900--Sobic002G185800 Sobic007G178900--Sobic005G046700 Sobic002G368300 Sobic002G368300 Sobic007G178900--Sobic002G368300 Sobic007G178900--Sobic006G197100 Sobic008G055100 Sobic008G055100 Sobic007G178900--Sobic008G055100 Sobic007G178900--Sobic007G176100 Sobic007G176100--Sobic007G176000 Sobic007G030501 Sobic007G030501 Sobic007G176100--Sobic007G030501 Sobic007G176100--Sobic002G185800 Sobic007G176100--Sobic005G046700 Sobic008G048400 Sobic008G048400 Sobic007G176100--Sobic008G048400 Sobic007G176100--Sobic007G178900 Sobic007G176100--Sobic002G216100 Sobic007G176100--Sobic004G139300 Sobic007G176100--Sobic006G197100 Sobic010G148800 Sobic010G148800 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic001G058300 Sobic001G058300 Sobic006G256900--Sobic001G058300 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G176000--Sobic007G030501 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic007G176000--Sobic002G185800 Sobic007G176000--Sobic004G139300 Sobic007G176000--Sobic008G055100
Octagon: transcription factors


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