Gene annotation
Transcriptome id Sobic.001G067100.1
Synonym RFNR2, ATRFNR2, Sb01g006100
Functional annotation ferredoxin--NADP reductase, chloroplast precursor, putative, expressed
UniProt C5WY84
Pfam PF00175
Panther DB PTHR19384 PTHR19384:SF54
NCBI CDD -
KEGG Orthology K02641; ferredoxin--NADP+ reductase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G30510 : root FNR 2
RAP-DB (Rice) LOC_Os03g57120.1 : ferredoxin--NADP reductase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a045006 , Zm00025a008457
Brachypodium KQK12877
Barley HORVU5Hr1G103180.4 , HORVU5Hr1G103180.5 , HORVU5Hr1G103180.7 , HORVU5Hr1G103180.1 , HORVU5Hr1G103180.2 , HORVU5Hr1G103180.3 , HORVU5Hr1G103180.8 , HORVU5Hr1G103180.9 , HORVU5Hr1G103180.10 , HORVU5Hr1G103180.11 , HORVU5Hr1G103180.6
Wheat TraesCS5A02G423000 , TraesCS5D02G431300 , TraesCS5B02G424900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
2 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
4 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
5 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
6 Sobic.002G185800 transporter, putative, expressed -
7 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
9 Sobic.007G165400 DNA binding protein, putative, expressed -
10 Sobic.003G349400 expressed protein -
11 Sobic.001G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -
12 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.006G135300 expressed protein -
14 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
15 Sobic.002G216100 cytochrome P450, putative, expressed -
16 Sobic.002G404100 annexin, putative, expressed -
17 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
18 Sobic.003G128800 expansin precursor, putative, expressed -
19 Sobic.001G055400 WRKY6, expressed -
20 Sobic.010G148800 WRKY31, expressed -


Gene co-expression network
sample Sobic001G067100 Sobic001G067100 Sobic008G011700 Sobic008G011700 Sobic001G067100--Sobic008G011700 Sobic003G426500 Sobic003G426500 Sobic001G067100--Sobic003G426500 Sobic003G203600 Sobic003G203600 Sobic001G067100--Sobic003G203600 Sobic007G100700 Sobic007G100700 Sobic001G067100--Sobic007G100700 Sobic003G182200 Sobic003G182200 Sobic001G067100--Sobic003G182200 Sobic002G185800 Sobic002G185800 Sobic001G067100--Sobic002G185800 Sobic010G066800 Sobic010G066800 Sobic001G067100--Sobic010G066800 Sobic003G228600 Sobic003G228600 Sobic001G067100--Sobic003G228600 Sobic007G165400 Sobic007G165400 Sobic001G067100--Sobic007G165400 Sobic008G011700--Sobic007G100700 Sobic008G011700--Sobic003G426500 Sobic008G011700--Sobic001G067100 Sobic008G011700--Sobic003G182200 Sobic008G011700--Sobic010G066800 Sobic002G255000 Sobic002G255000 Sobic008G011700--Sobic002G255000 Sobic003G349400 Sobic003G349400 Sobic008G011700--Sobic003G349400 Sobic003G140700 Sobic003G140700 Sobic008G011700--Sobic003G140700 Sobic004G306900 Sobic004G306900 Sobic008G011700--Sobic004G306900 Sobic003G426500--Sobic007G100700 Sobic003G426500--Sobic003G182200 Sobic003G426500--Sobic008G011700 Sobic003G426500--Sobic010G066800 Sobic003G426500--Sobic001G067100 Sobic002G068000 Sobic002G068000 Sobic003G426500--Sobic002G068000 Sobic009G259800 Sobic009G259800 Sobic003G426500--Sobic009G259800 Sobic010G158400 Sobic010G158400 Sobic003G426500--Sobic010G158400 Sobic003G426500--Sobic003G349400 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic010G082000 Sobic010G082000 Sobic003G203600--Sobic010G082000 Sobic003G203600--Sobic003G426500 Sobic006G028400 Sobic006G028400 Sobic003G203600--Sobic006G028400 Sobic006G092700 Sobic006G092700 Sobic003G203600--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic007G100700--Sobic003G182200 Sobic007G100700--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic007G100700--Sobic007G008600 Sobic007G100700--Sobic002G255000 Sobic007G100700--Sobic008G011700 Sobic007G100700--Sobic010G066800 Sobic006G106900 Sobic006G106900 Sobic007G100700--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic007G100700--Sobic003G064800 Sobic007G100700--Sobic004G306900 Sobic003G182200--Sobic007G100700 Sobic006G019700 Sobic006G019700 Sobic003G182200--Sobic006G019700 Sobic003G182200--Sobic003G426500 Sobic003G182200--Sobic006G092700 Sobic003G182200--Sobic008G011700 Sobic003G182200--Sobic004G306900 Sobic004G322100 Sobic004G322100 Sobic003G182200--Sobic004G322100 Sobic003G182200--Sobic009G259800 Sobic003G182200--Sobic007G008600 Sobic005G046700 Sobic005G046700 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic007G176000 Sobic007G176000 Sobic002G185800--Sobic007G176000 Sobic010G066800--Sobic007G100700 Sobic010G066800--Sobic003G426500 Sobic010G066800--Sobic003G349400 Sobic010G066800--Sobic002G068000 Sobic010G066800--Sobic003G182200 Sobic010G066800--Sobic007G008600 Sobic009G032900 Sobic009G032900 Sobic010G066800--Sobic009G032900 Sobic010G066800--Sobic008G011700 Sobic010G066800--Sobic002G255000 Sobic004G349125 Sobic004G349125 Sobic003G228600--Sobic004G349125 Sobic005G156500 Sobic005G156500 Sobic003G228600--Sobic005G156500 Sobic003G228600--Sobic004G038700 Sobic003G228600--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic003G228600--Sobic001G416200 Sobic003G228600--Sobic008G011700 Sobic003G228600--Sobic001G264000 Sobic003G228600--Sobic001G067100 Sobic006G274933 Sobic006G274933 Sobic003G228600--Sobic006G274933 Sobic007G165400--Sobic002G185800 Sobic007G165400--Sobic003G203600 Sobic003G015300 Sobic003G015300 Sobic007G165400--Sobic003G015300 Sobic007G165400--Sobic001G067100 Sobic007G165400--Sobic007G176000 Sobic007G165400--Sobic001G264000 Sobic010G110800 Sobic010G110800 Sobic007G165400--Sobic010G110800 Sobic007G165400--Sobic006G197100 Sobic002G001700 Sobic002G001700 Sobic007G165400--Sobic002G001700
Octagon: transcription factors


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