Gene annotation
Transcriptome id Sobic.010G066800.1
Synonym HCT, Sb10g005780
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transferase family protein, putative, expressed
UniProt C5Z5T8
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os06g08640.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049749 , Zm00025a042410
Brachypodium KQK19252 , KQK19253
Barley HORVU7Hr1G030740.4 , HORVU7Hr1G030740.3 , HORVU7Hr1G030740.2 , HORVU7Hr1G030780.1
Wheat TraesCS5A02G222900 , TraesCS5D02G230700 , TraesCS5B02G222000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
2 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.003G349400 expressed protein -
4 Sobic.002G068000 expressed protein -
5 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
6 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
7 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
9 Sobic.002G255000 AIR12, putative, expressed -
10 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
12 Sobic.003G064800 dirigent, putative, expressed -
13 Sobic.010G234500 O-methyltransferase, putative, expressed -
14 Sobic.005G127400 expressed protein -
15 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
16 Sobic.006G019700 transferase family protein, putative, expressed -
17 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
18 Sobic.001G416100 - -
19 Sobic.001G414800 dirigent, putative, expressed -
20 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type


Gene co-expression network
sample Sobic010G066800 Sobic010G066800 Sobic007G100700 Sobic007G100700 Sobic010G066800--Sobic007G100700 Sobic003G426500 Sobic003G426500 Sobic010G066800--Sobic003G426500 Sobic003G349400 Sobic003G349400 Sobic010G066800--Sobic003G349400 Sobic002G068000 Sobic002G068000 Sobic010G066800--Sobic002G068000 Sobic003G182200 Sobic003G182200 Sobic010G066800--Sobic003G182200 Sobic007G008600 Sobic007G008600 Sobic010G066800--Sobic007G008600 Sobic009G032900 Sobic009G032900 Sobic010G066800--Sobic009G032900 Sobic008G011700 Sobic008G011700 Sobic010G066800--Sobic008G011700 Sobic002G255000 Sobic002G255000 Sobic010G066800--Sobic002G255000 Sobic007G100700--Sobic003G182200 Sobic007G100700--Sobic003G426500 Sobic007G100700--Sobic007G008600 Sobic007G100700--Sobic002G255000 Sobic007G100700--Sobic008G011700 Sobic007G100700--Sobic010G066800 Sobic006G106900 Sobic006G106900 Sobic007G100700--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic007G100700--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic007G100700--Sobic004G306900 Sobic003G426500--Sobic007G100700 Sobic003G426500--Sobic003G182200 Sobic003G426500--Sobic008G011700 Sobic003G426500--Sobic010G066800 Sobic001G067100 Sobic001G067100 Sobic003G426500--Sobic001G067100 Sobic003G426500--Sobic002G068000 Sobic009G259800 Sobic009G259800 Sobic003G426500--Sobic009G259800 Sobic010G158400 Sobic010G158400 Sobic003G426500--Sobic010G158400 Sobic003G426500--Sobic003G349400 Sobic005G127400 Sobic005G127400 Sobic003G349400--Sobic005G127400 Sobic010G234500 Sobic010G234500 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic006G150100 Sobic006G150100 Sobic003G349400--Sobic006G150100 Sobic003G349400--Sobic002G255000 Sobic003G349400--Sobic003G064800 Sobic003G349400--Sobic010G066800 Sobic004G110700 Sobic004G110700 Sobic003G349400--Sobic004G110700 Sobic003G349400--Sobic007G100700 Sobic002G068000--Sobic009G032900 Sobic002G068000--Sobic003G349400 Sobic002G068000--Sobic010G158400 Sobic002G068000--Sobic010G234500 Sobic005G080600 Sobic005G080600 Sobic002G068000--Sobic005G080600 Sobic002G068000--Sobic009G259800 Sobic002G068000--Sobic003G426500 Sobic005G216700 Sobic005G216700 Sobic002G068000--Sobic005G216700 Sobic002G068000--Sobic010G066800 Sobic003G182200--Sobic007G100700 Sobic006G019700 Sobic006G019700 Sobic003G182200--Sobic006G019700 Sobic003G182200--Sobic003G426500 Sobic006G092700 Sobic006G092700 Sobic003G182200--Sobic006G092700 Sobic003G182200--Sobic008G011700 Sobic003G182200--Sobic004G306900 Sobic004G322100 Sobic004G322100 Sobic003G182200--Sobic004G322100 Sobic003G182200--Sobic009G259800 Sobic003G182200--Sobic007G008600 Sobic007G008600--Sobic002G255000 Sobic007G008600--Sobic007G100700 Sobic007G008600--Sobic003G064800 Sobic006G273300 Sobic006G273300 Sobic007G008600--Sobic006G273300 Sobic007G008600--Sobic006G106900 Sobic007G008600--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic007G008600--Sobic004G029100 Sobic007G008600--Sobic003G182200 Sobic006G225500 Sobic006G225500 Sobic007G008600--Sobic006G225500 Sobic009G032900--Sobic002G068000 Sobic004G351200 Sobic004G351200 Sobic009G032900--Sobic004G351200 Sobic009G032900--Sobic005G216700 Sobic009G032900--Sobic010G158400 Sobic002G334000 Sobic002G334000 Sobic009G032900--Sobic002G334000 Sobic010G139100 Sobic010G139100 Sobic009G032900--Sobic010G139100 Sobic007G206800 Sobic007G206800 Sobic009G032900--Sobic007G206800 Sobic003G046700 Sobic003G046700 Sobic009G032900--Sobic003G046700 Sobic003G269900 Sobic003G269900 Sobic009G032900--Sobic003G269900 Sobic008G011700--Sobic007G100700 Sobic008G011700--Sobic003G426500 Sobic008G011700--Sobic001G067100 Sobic008G011700--Sobic003G182200 Sobic008G011700--Sobic010G066800 Sobic008G011700--Sobic002G255000 Sobic008G011700--Sobic003G349400 Sobic003G140700 Sobic003G140700 Sobic008G011700--Sobic003G140700 Sobic008G011700--Sobic004G306900 Sobic002G255000--Sobic003G064800 Sobic002G255000--Sobic007G008600 Sobic001G438200 Sobic001G438200 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic001G238200 Sobic001G238200 Sobic002G255000--Sobic001G238200 Sobic002G255000--Sobic007G100700
Octagon: transcription factors


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