Gene annotation
Transcriptome id Sobic.003G349400.1
Synonym Sb03g039240
Functional annotation expressed protein
UniProt C5XP38
Pfam -
Panther DB PTHR38527 PTHR38527:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g62110.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G127400 expressed protein -
2 Sobic.010G234500 O-methyltransferase, putative, expressed -
3 Sobic.002G068000 expressed protein -
4 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.002G255000 AIR12, putative, expressed -
6 Sobic.003G064800 dirigent, putative, expressed -
7 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.004G110700 DNA binding protein, putative, expressed -
9 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
10 Sobic.001G237800 expansin precursor, putative, expressed -
11 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
12 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
15 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.003G140700 peroxidase precursor, putative, expressed -
17 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.006G019700 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G349400 Sobic003G349400 Sobic005G127400 Sobic005G127400 Sobic003G349400--Sobic005G127400 Sobic010G234500 Sobic010G234500 Sobic003G349400--Sobic010G234500 Sobic002G068000 Sobic002G068000 Sobic003G349400--Sobic002G068000 Sobic006G150100 Sobic006G150100 Sobic003G349400--Sobic006G150100 Sobic002G255000 Sobic002G255000 Sobic003G349400--Sobic002G255000 Sobic003G064800 Sobic003G064800 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic004G110700 Sobic004G110700 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic006G225500 Sobic006G225500 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic005G127400--Sobic006G150100 Sobic003G140700 Sobic003G140700 Sobic005G127400--Sobic003G140700 Sobic009G186500 Sobic009G186500 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic010G234500--Sobic001G238200 Sobic010G234500--Sobic009G186500 Sobic010G234500--Sobic002G068000 Sobic004G306900 Sobic004G306900 Sobic010G234500--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic010G234500--Sobic006G019700 Sobic009G032900 Sobic009G032900 Sobic002G068000--Sobic009G032900 Sobic002G068000--Sobic003G349400 Sobic010G158400 Sobic010G158400 Sobic002G068000--Sobic010G158400 Sobic002G068000--Sobic010G234500 Sobic005G080600 Sobic005G080600 Sobic002G068000--Sobic005G080600 Sobic009G259800 Sobic009G259800 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic005G216700 Sobic005G216700 Sobic002G068000--Sobic005G216700 Sobic002G068000--Sobic010G066800 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic002G003700 Sobic002G003700 Sobic006G150100--Sobic002G003700 Sobic006G150100--Sobic004G110700 Sobic006G170600 Sobic006G170600 Sobic006G150100--Sobic006G170600 Sobic006G150100--Sobic002G068000 Sobic006G150100--Sobic010G234500 Sobic006G150100--Sobic010G158400 Sobic006G150100--Sobic006G225500 Sobic002G255000--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic002G255000--Sobic007G008600 Sobic001G438200 Sobic001G438200 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic002G255000--Sobic007G100700 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic010G066800--Sobic007G100700 Sobic010G066800--Sobic003G426500 Sobic010G066800--Sobic003G349400 Sobic010G066800--Sobic002G068000 Sobic003G182200 Sobic003G182200 Sobic010G066800--Sobic003G182200 Sobic010G066800--Sobic007G008600 Sobic010G066800--Sobic009G032900 Sobic008G011700 Sobic008G011700 Sobic010G066800--Sobic008G011700 Sobic010G066800--Sobic002G255000 Sobic006G028500 Sobic006G028500 Sobic004G110700--Sobic006G028500 Sobic003G269600 Sobic003G269600 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic004G110700--Sobic002G003700 Sobic004G322100 Sobic004G322100 Sobic004G110700--Sobic004G322100 Sobic004G110700--Sobic005G127400 Sobic001G229000 Sobic001G229000 Sobic004G110700--Sobic001G229000 Sobic004G110700--Sobic006G019700 Sobic007G100700--Sobic003G182200 Sobic007G100700--Sobic003G426500 Sobic007G100700--Sobic007G008600 Sobic007G100700--Sobic002G255000 Sobic007G100700--Sobic008G011700 Sobic007G100700--Sobic010G066800 Sobic007G100700--Sobic006G106900 Sobic007G100700--Sobic003G064800 Sobic007G100700--Sobic004G306900
Octagon: transcription factors


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