Gene annotation
Transcriptome id Sobic.007G165400.1
Synonym AHL20
Functional annotation DNA binding protein, putative, expressed
UniProt A0A1B6PIE6
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14465 : AT-hook motif nuclear-localized protein 20
RAP-DB (Rice) LOC_Os08g44910.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a030516 , Zm00025a022635
Brachypodium KQJ84295 , KQJ94680 , KQJ94681 , PNT69452
Barley HORVU4Hr1G060280.1 , HORVU0Hr1G011700.1 , HORVU4Hr1G000870.6 , HORVU4Hr1G000870.5 , HORVU4Hr1G000870.3 , HORVU4Hr1G000870.2 , HORVU7Hr1G046930.1 , HORVU6Hr1G091740.4 , HORVU6Hr1G091740.1 , HORVU6Hr1G091740.3 , HORVU6Hr1G091740.2 , HORVU6Hr1G010470.1 , HORVU6Hr1G010470.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G185800 transporter, putative, expressed -
2 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
3 Sobic.003G015300 expressed protein -
4 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
5 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
7 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.006G197100 DNA binding protein, putative, expressed -
9 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
10 Sobic.004G009500 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
11 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G349125 - -
14 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
15 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
16 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
17 Sobic.004G038700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR5 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.002G318200 expressed protein -
19 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
20 Sobic.005G010100 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic007G165400 Sobic007G165400 Sobic002G185800 Sobic002G185800 Sobic007G165400--Sobic002G185800 Sobic003G203600 Sobic003G203600 Sobic007G165400--Sobic003G203600 Sobic003G015300 Sobic003G015300 Sobic007G165400--Sobic003G015300 Sobic001G067100 Sobic001G067100 Sobic007G165400--Sobic001G067100 Sobic007G176000 Sobic007G176000 Sobic007G165400--Sobic007G176000 Sobic001G264000 Sobic001G264000 Sobic007G165400--Sobic001G264000 Sobic010G110800 Sobic010G110800 Sobic007G165400--Sobic010G110800 Sobic006G197100 Sobic006G197100 Sobic007G165400--Sobic006G197100 Sobic002G001700 Sobic002G001700 Sobic007G165400--Sobic002G001700 Sobic005G046700 Sobic005G046700 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic002G185800--Sobic007G176000 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic010G082000 Sobic010G082000 Sobic003G203600--Sobic010G082000 Sobic003G426500 Sobic003G426500 Sobic003G203600--Sobic003G426500 Sobic006G028400 Sobic006G028400 Sobic003G203600--Sobic006G028400 Sobic006G092700 Sobic006G092700 Sobic003G203600--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic003G015300--Sobic010G110800 Sobic005G065900 Sobic005G065900 Sobic003G015300--Sobic005G065900 Sobic003G015300--Sobic007G165400 Sobic003G015300--Sobic005G046700 Sobic003G015300--Sobic007G170300 Sobic003G152200 Sobic003G152200 Sobic003G015300--Sobic003G152200 Sobic003G015300--Sobic002G001700 Sobic004G009500 Sobic004G009500 Sobic003G015300--Sobic004G009500 Sobic003G028300 Sobic003G028300 Sobic003G015300--Sobic003G028300 Sobic008G011700 Sobic008G011700 Sobic001G067100--Sobic008G011700 Sobic001G067100--Sobic003G426500 Sobic001G067100--Sobic003G203600 Sobic007G100700 Sobic007G100700 Sobic001G067100--Sobic007G100700 Sobic003G182200 Sobic003G182200 Sobic001G067100--Sobic003G182200 Sobic001G067100--Sobic002G185800 Sobic010G066800 Sobic010G066800 Sobic001G067100--Sobic010G066800 Sobic003G228600 Sobic003G228600 Sobic001G067100--Sobic003G228600 Sobic001G067100--Sobic007G165400 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G030501 Sobic007G030501 Sobic007G176000--Sobic007G030501 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic007G176000--Sobic002G185800 Sobic007G176000--Sobic004G139300 Sobic008G055100 Sobic008G055100 Sobic007G176000--Sobic008G055100 Sobic001G264000--Sobic006G197100 Sobic004G348800 Sobic004G348800 Sobic001G264000--Sobic004G348800 Sobic004G042000 Sobic004G042000 Sobic001G264000--Sobic004G042000 Sobic001G264000--Sobic002G185800 Sobic009G035300 Sobic009G035300 Sobic001G264000--Sobic009G035300 Sobic001G264000--Sobic006G256900 Sobic004G249000 Sobic004G249000 Sobic001G264000--Sobic004G249000 Sobic003G269600 Sobic003G269600 Sobic001G264000--Sobic003G269600 Sobic002G003800 Sobic002G003800 Sobic001G264000--Sobic002G003800 Sobic010G110800--Sobic003G015300 Sobic010G110800--Sobic002G001700 Sobic010G272300 Sobic010G272300 Sobic010G110800--Sobic010G272300 Sobic010G110800--Sobic005G065900 Sobic003G280400 Sobic003G280400 Sobic010G110800--Sobic003G280400 Sobic010G110800--Sobic006G256900 Sobic010G110800--Sobic006G197100 Sobic006G125100 Sobic006G125100 Sobic010G110800--Sobic006G125100 Sobic010G110800--Sobic002G185800 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic002G001700--Sobic004G139300 Sobic002G001700--Sobic006G197100 Sobic001G430100 Sobic001G430100 Sobic002G001700--Sobic001G430100 Sobic002G001700--Sobic006G256900 Sobic002G001700--Sobic010G110800 Sobic002G001700--Sobic001G264000 Sobic008G102800 Sobic008G102800 Sobic002G001700--Sobic008G102800 Sobic001G049900 Sobic001G049900 Sobic002G001700--Sobic001G049900 Sobic002G001700--Sobic005G065900
Octagon: transcription factors


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