Gene annotation
Transcriptome id Sobic.007G176100.1
Synonym Sb07g024790
Functional annotation MATE efflux family protein, putative, expressed
UniProt A0A1Z5RAF4
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF79
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G38030 : MATE efflux family protein
RAP-DB (Rice) LOC_Os08g43654.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048145 , Zm00025a017375 , Zm00025a017379 , Zm00025a001018 , Zm00025a032766 , Zm00025a014789 , Zm00025a014788 , Zm00025a053728 , Zm00025a048219 , Zm00025a007083 , Zm00025a031207 , Zm00025a013140 , Zm00025a034230 , Zm00025a007368
Brachypodium PNT69457 , PNT74408 , KQK01431 , PNT75015 , PNT75014 , KQJ99282 , KQK23215 , KQK14108 , KQK15995 , KQK15996 , KQK14361 , KQK14360 , PNT75013
Barley HORVU2Hr1G046420.8 , HORVU2Hr1G046420.4 , HORVU2Hr1G046420.5 , HORVU2Hr1G046420.7 , HORVU2Hr1G046420.2 , HORVU7Hr1G027270.11 , HORVU7Hr1G027270.10 , HORVU7Hr1G027270.13 , HORVU7Hr1G027270.12 , HORVU4Hr1G011690.4 , HORVU4Hr1G011690.7 , HORVU4Hr1G011690.1 , HORVU4Hr1G011690.3 , HORVU4Hr1G011690.2 , HORVU5Hr1G086830.3 , HORVU5Hr1G086830.4 , HORVU5Hr1G086830.6 , HORVU5Hr1G086830.7 , HORVU5Hr1G086830.8 , HORVU7Hr1G027270.1 , HORVU7Hr1G027270.3 , HORVU7Hr1G027270.2 , HORVU7Hr1G027270.5 , HORVU7Hr1G027270.4 , HORVU7Hr1G027270.7 , HORVU7Hr1G027270.6 , HORVU6Hr1G091840.2 , HORVU6Hr1G091840.1 , HORVU2Hr1G046420.16 , HORVU2Hr1G046420.17 , HORVU2Hr1G046420.14 , HORVU2Hr1G046420.10 , HORVU6Hr1G091850.1 , HORVU6Hr1G091850.2 , HORVU7Hr1G049240.5 , HORVU7Hr1G049240.6 , HORVU7Hr1G049240.2 , HORVU7Hr1G049240.3 , HORVU2Hr1G117540.2 , HORVU2Hr1G117540.3 , HORVU2Hr1G117540.1 , HORVU2Hr1G117540.6 , HORVU2Hr1G117540.7 , HORVU2Hr1G117540.4 , HORVU2Hr1G117540.5 , HORVU2Hr1G117540.8 , HORVU2Hr1G117540.9
Wheat TraesCS7A02G272800 , TraesCS7B02G030600 , TraesCS2A02G222300 , TraesCS6D02G384400 , TraesCS3A02G499200 , TraesCS7D02G272900 , TraesCS3A02G499200 , TraesCS3D02G506100 , TraesCS3D02G506100 , TraesCS4D02G068800 , TraesCS7D02G240600 , TraesCS1A02G029900 , TraesCS7A02G241600 , TraesCS7A02G130300 , TraesCS7B02G137200 , TraesCS6A02G400200 , TraesCS7D02G469000 , TraesCS7B02G384300 , TraesCS7D02G129700 , TraesCS2D02G228200 , TraesCS2D02G228200 , TraesCS7A02G482100 , TraesCS5A02G349100 , TraesCS6B02G440400 , TraesCS2B02G247700 , TraesCS5A02G349000 , TraesCS4A02G404500 , TraesCS3B02G485100 , TraesCS2B02G247700 , TraesCS7B02G170800 , TraesCS4B02G304300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.007G030501 - -
3 Sobic.002G185800 transporter, putative, expressed -
4 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.008G048400 citrate-binding protein precursor, putative, expressed -
6 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
7 Sobic.002G216100 cytochrome P450, putative, expressed -
8 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
9 Sobic.006G197100 DNA binding protein, putative, expressed -
10 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.007G165400 DNA binding protein, putative, expressed -
13 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
15 Sobic.004G349125 - -
16 Sobic.001G147900 cytochrome P450, putative, expressed -
17 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
18 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
19 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
20 Sobic.004G009500 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter


Gene co-expression network
sample Sobic007G176100 Sobic007G176100 Sobic007G176000 Sobic007G176000 Sobic007G176100--Sobic007G176000 Sobic007G030501 Sobic007G030501 Sobic007G176100--Sobic007G030501 Sobic002G185800 Sobic002G185800 Sobic007G176100--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic007G176100--Sobic005G046700 Sobic008G048400 Sobic008G048400 Sobic007G176100--Sobic008G048400 Sobic007G178900 Sobic007G178900 Sobic007G176100--Sobic007G178900 Sobic002G216100 Sobic002G216100 Sobic007G176100--Sobic002G216100 Sobic004G139300 Sobic004G139300 Sobic007G176100--Sobic004G139300 Sobic006G197100 Sobic006G197100 Sobic007G176100--Sobic006G197100 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G176000--Sobic007G030501 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic007G176000--Sobic002G185800 Sobic007G176000--Sobic004G139300 Sobic008G055100 Sobic008G055100 Sobic007G176000--Sobic008G055100 Sobic007G030501--Sobic007G176100 Sobic007G030501--Sobic007G176000 Sobic007G030501--Sobic006G197100 Sobic003G368600 Sobic003G368600 Sobic007G030501--Sobic003G368600 Sobic004G349125 Sobic004G349125 Sobic007G030501--Sobic004G349125 Sobic007G030501--Sobic004G139300 Sobic002G261300 Sobic002G261300 Sobic007G030501--Sobic002G261300 Sobic010G252500 Sobic010G252500 Sobic007G030501--Sobic010G252500 Sobic002G042200 Sobic002G042200 Sobic007G030501--Sobic002G042200 Sobic002G185800--Sobic005G046700 Sobic002G185800--Sobic004G139300 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic002G185800--Sobic007G178900 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic002G185800--Sobic007G176000 Sobic005G046700--Sobic002G185800 Sobic002G101400 Sobic002G101400 Sobic005G046700--Sobic002G101400 Sobic007G170300 Sobic007G170300 Sobic005G046700--Sobic007G170300 Sobic005G046700--Sobic007G178900 Sobic005G046700--Sobic002G216100 Sobic005G046700--Sobic007G176100 Sobic002G404100 Sobic002G404100 Sobic005G046700--Sobic002G404100 Sobic005G046700--Sobic007G176000 Sobic005G046700--Sobic004G139300 Sobic008G048400--Sobic007G176100 Sobic008G048400--Sobic002G216100 Sobic010G096400 Sobic010G096400 Sobic008G048400--Sobic010G096400 Sobic008G048400--Sobic002G185800 Sobic008G048400--Sobic004G139300 Sobic008G034700 Sobic008G034700 Sobic008G048400--Sobic008G034700 Sobic008G048400--Sobic007G176000 Sobic003G269600 Sobic003G269600 Sobic008G048400--Sobic003G269600 Sobic006G183900 Sobic006G183900 Sobic008G048400--Sobic006G183900 Sobic007G178900--Sobic007G176000 Sobic007G178900--Sobic002G216100 Sobic007G178900--Sobic004G139300 Sobic007G178900--Sobic002G185800 Sobic007G178900--Sobic005G046700 Sobic002G368300 Sobic002G368300 Sobic007G178900--Sobic002G368300 Sobic007G178900--Sobic006G197100 Sobic007G178900--Sobic008G055100 Sobic007G178900--Sobic007G176100 Sobic002G216100--Sobic004G139300 Sobic002G216100--Sobic002G404100 Sobic002G216100--Sobic007G178900 Sobic010G113100 Sobic010G113100 Sobic002G216100--Sobic010G113100 Sobic002G216100--Sobic007G176000 Sobic002G216100--Sobic002G185800 Sobic001G360500 Sobic001G360500 Sobic002G216100--Sobic001G360500 Sobic002G216100--Sobic005G046700 Sobic002G216100--Sobic002G042200 Sobic004G139300--Sobic002G216100 Sobic004G139300--Sobic002G042200 Sobic002G001700 Sobic002G001700 Sobic004G139300--Sobic002G001700 Sobic004G139300--Sobic002G185800 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic004G139300--Sobic007G178900 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic006G197100--Sobic003G368600
Octagon: transcription factors


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