Gene annotation
Transcriptome id Sobic.004G310200.1
Synonym Sb04g034250
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
receptor-like protein kinase like protein, putative, expressed
UniProt C5XSW0
Pfam PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF81
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G35370 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os02g52850.1 : receptor-like protein kinase like protein, putative, expressed
MaizeGDB (Corn) Zm00025a022229 , Zm00025a022232
Brachypodium KQJ90504 , PNT69563
Barley HORVU6Hr1G080460.1 , HORVU1Hr1G080600.1 , HORVU1Hr1G080600.3 , HORVU5Hr1G089400.1 , HORVU0Hr1G011480.1 , HORVU0Hr1G011480.2 , HORVU0Hr1G011480.3
Wheat TraesCS7B02G357100 , TraesCS1A02G356600 , TraesCS3A02G246100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
3 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
4 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
6 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.010G252401 - K14488: SAUR family protein
8 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
9 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
10 Sobic.006G197100 DNA binding protein, putative, expressed -
11 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.001G304201 - -
13 Sobic.004G349125 - -
14 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
15 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
16 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
18 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
19 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
20 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)


Gene co-expression network
sample Sobic004G310200 Sobic004G310200 Sobic002G003800 Sobic002G003800 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G042000 Sobic004G042000 Sobic004G310200--Sobic004G042000 Sobic001G304100 Sobic001G304100 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic001G500000 Sobic001G500000 Sobic004G310200--Sobic001G500000 Sobic010G252401 Sobic010G252401 Sobic004G310200--Sobic010G252401 Sobic002G213600 Sobic002G213600 Sobic004G310200--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic004G310200--Sobic003G084400 Sobic006G197100 Sobic006G197100 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic002G003800--Sobic001G302600 Sobic002G003800--Sobic001G049900 Sobic001G416200 Sobic001G416200 Sobic002G003800--Sobic001G416200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic004G297900 Sobic004G297900 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic009G188000 Sobic009G188000 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800 Sobic001G049900--Sobic003G311800 Sobic001G049900--Sobic002G003800 Sobic010G184800 Sobic010G184800 Sobic001G049900--Sobic010G184800 Sobic001G049900--Sobic009G109000 Sobic001G430100 Sobic001G430100 Sobic001G049900--Sobic001G430100 Sobic001G049900--Sobic006G197100 Sobic008G055100 Sobic008G055100 Sobic001G049900--Sobic008G055100 Sobic001G049900--Sobic004G042000 Sobic001G049900--Sobic004G310200 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic004G046200 Sobic004G046200 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic001G500000--Sobic009G111000 Sobic001G231700 Sobic001G231700 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000 Sobic010G252401--Sobic004G310200 Sobic010G252401--Sobic002G003800 Sobic009G181800 Sobic009G181800 Sobic010G252401--Sobic009G181800 Sobic010G252401--Sobic004G042000 Sobic003G319500 Sobic003G319500 Sobic010G252401--Sobic003G319500 Sobic010G252401--Sobic001G500000 Sobic010G252401--Sobic004G046200 Sobic010G252401--Sobic010G184800 Sobic001G139100 Sobic001G139100 Sobic010G252401--Sobic001G139100 Sobic002G213600--Sobic001G304100 Sobic002G213600--Sobic004G042000 Sobic003G016100 Sobic003G016100 Sobic002G213600--Sobic003G016100 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G213600--Sobic002G003800 Sobic004G318700 Sobic004G318700 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic002G213600--Sobic001G304201 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic003G084400--Sobic001G313600
Octagon: transcription factors


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