Gene annotation
Transcriptome id Sobic.010G252401.1
Synonym -
Functional annotation -
UniProt A0A1W0VUN9
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF27
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT2G24400 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os06g48850.1 : OsSAUR27 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a041771 , Zm00025a009856 , Zm00025a056980 , Zm00025a047130
Brachypodium KQJ84465 , KQK17405 , KQJ90367
Barley HORVU2Hr1G100360.2 , HORVU5Hr1G062580.1 , HORVU6Hr1G020820.9 , HORVU6Hr1G020820.3 , HORVU6Hr1G020820.4 , HORVU6Hr1G020820.5 , HORVU6Hr1G020820.6 , HORVU6Hr1G020820.10 , HORVU7Hr1G096880.1 , HORVU6Hr1G020820.8 , HORVU2Hr1G100360.3 , HORVU2Hr1G100360.1 , HORVU6Hr1G020820.12 , HORVU6Hr1G020820.13 , HORVU6Hr1G020820.11 , HORVU5Hr1G062580.2
Wheat TraesCS5B02G212500 , TraesCS5A02G211300 , TraesCS5D02G222500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
2 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
4 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
5 Sobic.003G319500 receptor protein kinase, putative, expressed -
6 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
8 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
9 Sobic.001G139100 expressed protein -
10 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
11 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
12 Sobic.003G119500 expressed protein -
13 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
15 Sobic.003G316000 expressed protein -
16 Sobic.006G197100 DNA binding protein, putative, expressed -
17 Sobic.002G176100 membrane protein, putative, expressed -
18 Sobic.003G016100 expressed protein -
19 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein


Gene co-expression network
sample Sobic010G252401 Sobic010G252401 Sobic004G310200 Sobic004G310200 Sobic010G252401--Sobic004G310200 Sobic002G003800 Sobic002G003800 Sobic010G252401--Sobic002G003800 Sobic009G181800 Sobic009G181800 Sobic010G252401--Sobic009G181800 Sobic004G042000 Sobic004G042000 Sobic010G252401--Sobic004G042000 Sobic003G319500 Sobic003G319500 Sobic010G252401--Sobic003G319500 Sobic001G500000 Sobic001G500000 Sobic010G252401--Sobic001G500000 Sobic004G046200 Sobic004G046200 Sobic010G252401--Sobic004G046200 Sobic010G184800 Sobic010G184800 Sobic010G252401--Sobic010G184800 Sobic001G139100 Sobic001G139100 Sobic010G252401--Sobic001G139100 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G310200--Sobic004G042000 Sobic001G304100 Sobic001G304100 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic004G310200--Sobic001G500000 Sobic004G310200--Sobic010G252401 Sobic002G213600 Sobic002G213600 Sobic004G310200--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic004G310200--Sobic003G084400 Sobic006G197100 Sobic006G197100 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic002G003800--Sobic001G302600 Sobic002G003800--Sobic001G049900 Sobic001G416200 Sobic001G416200 Sobic002G003800--Sobic001G416200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic001G418100 Sobic001G418100 Sobic009G181800--Sobic001G418100 Sobic003G219800 Sobic003G219800 Sobic009G181800--Sobic003G219800 Sobic009G181800--Sobic010G252401 Sobic008G186100 Sobic008G186100 Sobic009G181800--Sobic008G186100 Sobic005G113300 Sobic005G113300 Sobic009G181800--Sobic005G113300 Sobic003G027400 Sobic003G027400 Sobic009G181800--Sobic003G027400 Sobic002G393400 Sobic002G393400 Sobic009G181800--Sobic002G393400 Sobic002G250000 Sobic002G250000 Sobic009G181800--Sobic002G250000 Sobic009G181800--Sobic004G310200 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic002G176100 Sobic002G176100 Sobic003G319500--Sobic002G176100 Sobic003G417200 Sobic003G417200 Sobic003G319500--Sobic003G417200 Sobic009G111000 Sobic009G111000 Sobic003G319500--Sobic009G111000 Sobic003G319500--Sobic002G213600 Sobic003G319500--Sobic001G304100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic005G107900 Sobic005G107900 Sobic003G319500--Sobic005G107900 Sobic003G319500--Sobic003G084400 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic001G500000--Sobic009G111000 Sobic001G231700 Sobic001G231700 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic006G044100 Sobic006G044100 Sobic004G046200--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic004G046200--Sobic003G084400 Sobic003G255200 Sobic003G255200 Sobic004G046200--Sobic003G255200 Sobic004G046200--Sobic001G500000 Sobic004G046200--Sobic003G079400 Sobic004G046200--Sobic009G111000 Sobic010G184800--Sobic001G304100 Sobic010G184800--Sobic009G111000 Sobic010G184800--Sobic001G049900 Sobic010G029700 Sobic010G029700 Sobic010G184800--Sobic010G029700 Sobic010G184800--Sobic008G186100 Sobic010G184800--Sobic001G231700 Sobic010G184800--Sobic002G176100 Sobic010G184800--Sobic004G046200 Sobic006G234800 Sobic006G234800 Sobic010G184800--Sobic006G234800 Sobic006G249300 Sobic006G249300 Sobic001G139100--Sobic006G249300 Sobic009G229000 Sobic009G229000 Sobic001G139100--Sobic009G229000 Sobic001G139100--Sobic008G186100 Sobic001G139100--Sobic001G169500 Sobic010G259600 Sobic010G259600 Sobic001G139100--Sobic010G259600 Sobic001G139100--Sobic003G319500 Sobic001G139100--Sobic004G046200 Sobic001G389000 Sobic001G389000 Sobic001G139100--Sobic001G389000 Sobic007G087200 Sobic007G087200 Sobic001G139100--Sobic007G087200
Octagon: transcription factors


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