Gene annotation
Transcriptome id Sobic.009G181800.1
Synonym CYP98, Sb09g024210, CYP98A3,cytochrome P450
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
- (PubMedID : 9484480)
cytochrome P450, putative, expressed
UniProt C5Z0A1 , O48956
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF0
NCBI CDD -
KEGG Orthology K09754; CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G40890 : cytochrome P450, family 98, subfamily A, polypeptide 3
RAP-DB (Rice) LOC_Os05g41440.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a027173 , Zm00025a044084
Brachypodium KQK05634
Barley HORVU1Hr1G068030.4 , HORVU1Hr1G068030.1 , HORVU1Hr1G068030.2 , HORVU1Hr1G068030.3 , HORVU0Hr1G031710.2 , HORVU0Hr1G031710.3 , HORVU0Hr1G031710.1 , HORVU3Hr1G078660.4 , HORVU3Hr1G078660.5 , HORVU3Hr1G078660.2 , HORVU3Hr1G078660.3 , HORVU3Hr1G078660.1
Wheat TraesCS1B02G321800 , TraesCS1A02G310500 , TraesCS1D02G310000 , TraesCS3A02G331800 , TraesCS1B02G321800 , TraesCS3D02G325300 , TraesCS4B02G393700 , TraesCSU02G032400 , TraesCSU02G032500 , TraesCS5A02G554000 , TraesCS3B02G361900
Populus -


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cDNA sequences
Sobic.009G181800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.003G219800 transferase family protein, putative, expressed -
3 Sobic.010G252401 - K14488: SAUR family protein
4 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
6 Sobic.003G027400 VQ domain containing protein, putative, expressed -
7 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
8 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
9 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
10 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.006G249300 expressed protein -
12 Sobic.009G033300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G046900 expressed protein -
14 Sobic.004G234100 phosphoglycerate mutase, putative, expressed -
15 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
16 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.002G251900 chaperone protein dnaJ 10, putative, expressed -
18 Sobic.001G139100 expressed protein -
19 Sobic.003G316000 expressed protein -
20 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein


Gene co-expression network
sample Sobic009G181800 Sobic009G181800 Sobic001G418100 Sobic001G418100 Sobic009G181800--Sobic001G418100 Sobic003G219800 Sobic003G219800 Sobic009G181800--Sobic003G219800 Sobic010G252401 Sobic010G252401 Sobic009G181800--Sobic010G252401 Sobic008G186100 Sobic008G186100 Sobic009G181800--Sobic008G186100 Sobic005G113300 Sobic005G113300 Sobic009G181800--Sobic005G113300 Sobic003G027400 Sobic003G027400 Sobic009G181800--Sobic003G027400 Sobic002G393400 Sobic002G393400 Sobic009G181800--Sobic002G393400 Sobic002G250000 Sobic002G250000 Sobic009G181800--Sobic002G250000 Sobic004G310200 Sobic004G310200 Sobic009G181800--Sobic004G310200 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic002G396400 Sobic002G396400 Sobic001G418100--Sobic002G396400 Sobic001G418100--Sobic009G181800 Sobic002G154600 Sobic002G154600 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic002G128800 Sobic002G128800 Sobic001G418100--Sobic002G128800 Sobic001G475500 Sobic001G475500 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic006G156000 Sobic006G156000 Sobic003G219800--Sobic006G156000 Sobic003G443300 Sobic003G443300 Sobic003G219800--Sobic003G443300 Sobic001G040100 Sobic001G040100 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic010G252401--Sobic004G310200 Sobic002G003800 Sobic002G003800 Sobic010G252401--Sobic002G003800 Sobic010G252401--Sobic009G181800 Sobic004G042000 Sobic004G042000 Sobic010G252401--Sobic004G042000 Sobic003G319500 Sobic003G319500 Sobic010G252401--Sobic003G319500 Sobic001G500000 Sobic001G500000 Sobic010G252401--Sobic001G500000 Sobic004G046200 Sobic004G046200 Sobic010G252401--Sobic004G046200 Sobic010G184800 Sobic010G184800 Sobic010G252401--Sobic010G184800 Sobic001G139100 Sobic001G139100 Sobic010G252401--Sobic001G139100 Sobic005G011300 Sobic005G011300 Sobic008G186100--Sobic005G011300 Sobic002G287100 Sobic002G287100 Sobic008G186100--Sobic002G287100 Sobic004G100700 Sobic004G100700 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic010G029700 Sobic010G029700 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic008G186100--Sobic001G139100 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500 Sobic004G220000 Sobic004G220000 Sobic005G113300--Sobic004G220000 Sobic001G295200 Sobic001G295200 Sobic005G113300--Sobic001G295200 Sobic001G361600 Sobic001G361600 Sobic005G113300--Sobic001G361600 Sobic006G116700 Sobic006G116700 Sobic005G113300--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic005G113300--Sobic001G018900 Sobic007G197800 Sobic007G197800 Sobic005G113300--Sobic007G197800 Sobic009G076400 Sobic009G076400 Sobic005G113300--Sobic009G076400 Sobic002G379500 Sobic002G379500 Sobic005G113300--Sobic002G379500 Sobic003G160700 Sobic003G160700 Sobic005G113300--Sobic003G160700 Sobic003G027400--Sobic003G160700 Sobic003G027400--Sobic006G249300 Sobic009G248100 Sobic009G248100 Sobic003G027400--Sobic009G248100 Sobic010G221300 Sobic010G221300 Sobic003G027400--Sobic010G221300 Sobic001G481000 Sobic001G481000 Sobic003G027400--Sobic001G481000 Sobic003G027400--Sobic005G113300 Sobic002G387900 Sobic002G387900 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic003G393900 Sobic003G393900 Sobic002G393400--Sobic003G393900 Sobic009G054800 Sobic009G054800 Sobic002G393400--Sobic009G054800 Sobic002G372400 Sobic002G372400 Sobic002G393400--Sobic002G372400 Sobic004G065500 Sobic004G065500 Sobic002G393400--Sobic004G065500 Sobic002G393400--Sobic005G113300 Sobic010G230700 Sobic010G230700 Sobic002G393400--Sobic010G230700 Sobic004G280700 Sobic004G280700 Sobic002G393400--Sobic004G280700 Sobic004G008400 Sobic004G008400 Sobic002G393400--Sobic004G008400 Sobic003G037800 Sobic003G037800 Sobic002G393400--Sobic003G037800 Sobic002G234400 Sobic002G234400 Sobic002G250000--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G250000--Sobic001G397300 Sobic002G250000--Sobic010G029700 Sobic002G250000--Sobic008G186100 Sobic002G250000--Sobic005G011300 Sobic007G006300 Sobic007G006300 Sobic002G250000--Sobic007G006300 Sobic004G108200 Sobic004G108200 Sobic002G250000--Sobic004G108200 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G310200--Sobic004G042000 Sobic001G304100 Sobic001G304100 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic004G310200--Sobic001G500000 Sobic004G310200--Sobic010G252401 Sobic002G213600 Sobic002G213600 Sobic004G310200--Sobic002G213600 Sobic004G310200--Sobic003G084400
Octagon: transcription factors


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