Gene annotation
Transcriptome id Sobic.002G393400.1
Synonym Sb02g040870
Functional annotation chaperonin, putative, expressed
UniProt C5X3E1
Pfam PF00166
Panther DB PTHR10772 PTHR10772:SF12
NCBI CDD KOG1641; Mitochondrial chaperonin
KEGG Orthology K04078; groES, chaperonin GroES
Gene Ontology GO:0006457; protein folding GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT1G23100 : GroES-like family protein
RAP-DB (Rice) LOC_Os07g44740.1 : chaperonin, putative, expressed
MaizeGDB (Corn) Zm00025a043975 , Zm00025a015301 , Zm00025a048943
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
2 Sobic.009G054800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
3 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
4 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
5 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
6 Sobic.010G230700 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
7 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
8 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
9 Sobic.003G037800 transferase family protein, putative, expressed -
10 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
11 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
12 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
13 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
15 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
16 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
17 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
18 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
19 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
20 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e


Gene co-expression network
sample Sobic002G393400 Sobic002G393400 Sobic003G393900 Sobic003G393900 Sobic002G393400--Sobic003G393900 Sobic009G054800 Sobic009G054800 Sobic002G393400--Sobic009G054800 Sobic002G372400 Sobic002G372400 Sobic002G393400--Sobic002G372400 Sobic004G065500 Sobic004G065500 Sobic002G393400--Sobic004G065500 Sobic005G113300 Sobic005G113300 Sobic002G393400--Sobic005G113300 Sobic010G230700 Sobic010G230700 Sobic002G393400--Sobic010G230700 Sobic004G280700 Sobic004G280700 Sobic002G393400--Sobic004G280700 Sobic004G008400 Sobic004G008400 Sobic002G393400--Sobic004G008400 Sobic003G037800 Sobic003G037800 Sobic002G393400--Sobic003G037800 Sobic004G141200 Sobic004G141200 Sobic003G393900--Sobic004G141200 Sobic001G108200 Sobic001G108200 Sobic003G393900--Sobic001G108200 Sobic001G459800 Sobic001G459800 Sobic003G393900--Sobic001G459800 Sobic004G100700 Sobic004G100700 Sobic003G393900--Sobic004G100700 Sobic002G188900 Sobic002G188900 Sobic003G393900--Sobic002G188900 Sobic003G393900--Sobic004G065500 Sobic006G267200 Sobic006G267200 Sobic003G393900--Sobic006G267200 Sobic005G011300 Sobic005G011300 Sobic003G393900--Sobic005G011300 Sobic003G369100 Sobic003G369100 Sobic003G393900--Sobic003G369100 Sobic003G078200 Sobic003G078200 Sobic009G054800--Sobic003G078200 Sobic010G206200 Sobic010G206200 Sobic009G054800--Sobic010G206200 Sobic009G054800--Sobic002G372400 Sobic005G019700 Sobic005G019700 Sobic009G054800--Sobic005G019700 Sobic007G197800 Sobic007G197800 Sobic009G054800--Sobic007G197800 Sobic009G054800--Sobic010G230700 Sobic009G050300 Sobic009G050300 Sobic009G054800--Sobic009G050300 Sobic004G198400 Sobic004G198400 Sobic009G054800--Sobic004G198400 Sobic006G116700 Sobic006G116700 Sobic009G054800--Sobic006G116700 Sobic002G372400--Sobic003G078200 Sobic002G372400--Sobic009G054800 Sobic010G076400 Sobic010G076400 Sobic002G372400--Sobic010G076400 Sobic002G372400--Sobic010G230700 Sobic007G018300 Sobic007G018300 Sobic002G372400--Sobic007G018300 Sobic002G372400--Sobic005G019700 Sobic009G223300 Sobic009G223300 Sobic002G372400--Sobic009G223300 Sobic002G372400--Sobic009G050300 Sobic002G372400--Sobic004G198400 Sobic004G065500--Sobic006G267200 Sobic004G065500--Sobic001G459800 Sobic004G065500--Sobic003G393900 Sobic007G074000 Sobic007G074000 Sobic004G065500--Sobic007G074000 Sobic010G086200 Sobic010G086200 Sobic004G065500--Sobic010G086200 Sobic004G306300 Sobic004G306300 Sobic004G065500--Sobic004G306300 Sobic003G228900 Sobic003G228900 Sobic004G065500--Sobic003G228900 Sobic004G321300 Sobic004G321300 Sobic004G065500--Sobic004G321300 Sobic009G247900 Sobic009G247900 Sobic004G065500--Sobic009G247900 Sobic004G220000 Sobic004G220000 Sobic005G113300--Sobic004G220000 Sobic001G295200 Sobic001G295200 Sobic005G113300--Sobic001G295200 Sobic001G361600 Sobic001G361600 Sobic005G113300--Sobic001G361600 Sobic005G113300--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic005G113300--Sobic001G018900 Sobic005G113300--Sobic007G197800 Sobic009G076400 Sobic009G076400 Sobic005G113300--Sobic009G076400 Sobic002G379500 Sobic002G379500 Sobic005G113300--Sobic002G379500 Sobic003G160700 Sobic003G160700 Sobic005G113300--Sobic003G160700 Sobic010G230700--Sobic005G019700 Sobic010G230700--Sobic007G018300 Sobic004G104100 Sobic004G104100 Sobic010G230700--Sobic004G104100 Sobic010G230700--Sobic009G054800 Sobic006G221200 Sobic006G221200 Sobic010G230700--Sobic006G221200 Sobic010G230700--Sobic009G050300 Sobic001G091801 Sobic001G091801 Sobic010G230700--Sobic001G091801 Sobic007G019000 Sobic007G019000 Sobic010G230700--Sobic007G019000 Sobic010G230700--Sobic002G372400 Sobic004G280700--Sobic004G198400 Sobic004G280700--Sobic001G091801 Sobic009G215200 Sobic009G215200 Sobic004G280700--Sobic009G215200 Sobic009G166500 Sobic009G166500 Sobic004G280700--Sobic009G166500 Sobic006G213000 Sobic006G213000 Sobic004G280700--Sobic006G213000 Sobic004G280700--Sobic009G050300 Sobic006G047400 Sobic006G047400 Sobic004G280700--Sobic006G047400 Sobic004G280700--Sobic006G116700 Sobic004G280700--Sobic010G206200 Sobic004G008400--Sobic009G050300 Sobic007G178600 Sobic007G178600 Sobic004G008400--Sobic007G178600 Sobic003G346600 Sobic003G346600 Sobic004G008400--Sobic003G346600 Sobic004G008400--Sobic006G116700 Sobic002G255300 Sobic002G255300 Sobic004G008400--Sobic002G255300 Sobic004G008400--Sobic007G197800 Sobic003G436700 Sobic003G436700 Sobic004G008400--Sobic003G436700 Sobic006G137100 Sobic006G137100 Sobic004G008400--Sobic006G137100 Sobic004G008400--Sobic002G379500 Sobic003G429000 Sobic003G429000 Sobic003G037800--Sobic003G429000 Sobic002G245100 Sobic002G245100 Sobic003G037800--Sobic002G245100 Sobic001G389000 Sobic001G389000 Sobic003G037800--Sobic001G389000 Sobic009G033700 Sobic009G033700 Sobic003G037800--Sobic009G033700 Sobic009G159400 Sobic009G159400 Sobic003G037800--Sobic009G159400 Sobic005G018700 Sobic005G018700 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic003G037800--Sobic004G321300 Sobic004G340900 Sobic004G340900 Sobic003G037800--Sobic004G340900
Octagon: transcription factors


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