Gene annotation
Transcriptome id Sobic.003G037800.1
Synonym Sb03g003390
Functional annotation transferase family protein, putative, expressed
UniProt C5XM19
Pfam PF02458
Panther DB PTHR31147:SF5 PTHR31147
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT3G62160 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os01g09010.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023099 , Zm00025a042264
Brachypodium KQK03085
Barley HORVU3Hr1G020230.1 , HORVU3Hr1G020230.2 , HORVU3Hr1G020230.3
Wheat TraesCS3B02G132400 , TraesCS3D02G113600 , TraesCS3A02G111400
Populus -


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cDNA sequences
Sobic.003G037800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
2 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
3 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
4 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
5 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
6 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
7 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
8 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
10 Sobic.005G196800 membrane protein, putative, expressed -
11 Sobic.010G086200 GRAM domain containing protein, expressed -
12 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
14 Sobic.009G248500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein, expressed -
15 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
16 Sobic.003G264500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
18 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.004G101300 expressed protein -
20 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase


Gene co-expression network
sample Sobic003G037800 Sobic003G037800 Sobic003G429000 Sobic003G429000 Sobic003G037800--Sobic003G429000 Sobic002G245100 Sobic002G245100 Sobic003G037800--Sobic002G245100 Sobic001G389000 Sobic001G389000 Sobic003G037800--Sobic001G389000 Sobic009G033700 Sobic009G033700 Sobic003G037800--Sobic009G033700 Sobic009G159400 Sobic009G159400 Sobic003G037800--Sobic009G159400 Sobic005G018700 Sobic005G018700 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic004G321300 Sobic004G321300 Sobic003G037800--Sobic004G321300 Sobic004G340900 Sobic004G340900 Sobic003G037800--Sobic004G340900 Sobic003G429000--Sobic003G037800 Sobic003G429000--Sobic005G018700 Sobic001G050100 Sobic001G050100 Sobic003G429000--Sobic001G050100 Sobic003G429000--Sobic001G389000 Sobic002G329000 Sobic002G329000 Sobic003G429000--Sobic002G329000 Sobic003G429000--Sobic002G245100 Sobic003G429000--Sobic009G159400 Sobic007G184600 Sobic007G184600 Sobic003G429000--Sobic007G184600 Sobic002G175100 Sobic002G175100 Sobic003G429000--Sobic002G175100 Sobic002G245100--Sobic005G018700 Sobic002G245100--Sobic003G037800 Sobic004G237800 Sobic004G237800 Sobic002G245100--Sobic004G237800 Sobic002G202600 Sobic002G202600 Sobic002G245100--Sobic002G202600 Sobic005G196800 Sobic005G196800 Sobic002G245100--Sobic005G196800 Sobic002G245100--Sobic004G340900 Sobic002G245100--Sobic004G321300 Sobic003G158500 Sobic003G158500 Sobic002G245100--Sobic003G158500 Sobic001G107400 Sobic001G107400 Sobic002G245100--Sobic001G107400 Sobic001G389000--Sobic009G159400 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic006G092500 Sobic006G092500 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G038900 Sobic001G038900 Sobic001G389000--Sobic001G038900 Sobic001G389000--Sobic003G429000 Sobic010G086200 Sobic010G086200 Sobic009G033700--Sobic010G086200 Sobic009G033700--Sobic003G037800 Sobic001G281400 Sobic001G281400 Sobic009G033700--Sobic001G281400 Sobic003G249800 Sobic003G249800 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G129000 Sobic009G129000 Sobic009G033700--Sobic009G129000 Sobic009G033700--Sobic002G245100 Sobic009G143400 Sobic009G143400 Sobic009G033700--Sobic009G143400 Sobic004G065500 Sobic004G065500 Sobic009G033700--Sobic004G065500 Sobic009G159400--Sobic001G038900 Sobic001G435000 Sobic001G435000 Sobic009G159400--Sobic001G435000 Sobic009G159400--Sobic004G321300 Sobic003G345100 Sobic003G345100 Sobic009G159400--Sobic003G345100 Sobic004G208700 Sobic004G208700 Sobic009G159400--Sobic004G208700 Sobic001G140900 Sobic001G140900 Sobic009G159400--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic009G159400--Sobic004G237800 Sobic005G018700--Sobic002G245100 Sobic002G017800 Sobic002G017800 Sobic005G018700--Sobic002G017800 Sobic006G103000 Sobic006G103000 Sobic005G018700--Sobic006G103000 Sobic010G185000 Sobic010G185000 Sobic005G018700--Sobic010G185000 Sobic005G018700--Sobic003G429000 Sobic005G018700--Sobic003G037800 Sobic005G018700--Sobic004G340900 Sobic005G018700--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic005G018700--Sobic003G192100 Sobic006G179500 Sobic006G179500 Sobic006G183400--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic006G183400--Sobic002G140300 Sobic006G183400--Sobic005G196800 Sobic001G247300 Sobic001G247300 Sobic006G183400--Sobic001G247300 Sobic004G222500 Sobic004G222500 Sobic006G183400--Sobic004G222500 Sobic006G183400--Sobic003G037800 Sobic009G247900 Sobic009G247900 Sobic006G183400--Sobic009G247900 Sobic002G359300 Sobic002G359300 Sobic006G183400--Sobic002G359300 Sobic003G264500 Sobic003G264500 Sobic006G183400--Sobic003G264500 Sobic004G321300--Sobic004G237800 Sobic004G321300--Sobic009G159400 Sobic008G136400 Sobic008G136400 Sobic004G321300--Sobic008G136400 Sobic008G139600 Sobic008G139600 Sobic004G321300--Sobic008G139600 Sobic004G321300--Sobic001G038900 Sobic002G055700 Sobic002G055700 Sobic004G321300--Sobic002G055700 Sobic004G321300--Sobic001G140900 Sobic005G091500 Sobic005G091500 Sobic004G321300--Sobic005G091500 Sobic004G321300--Sobic003G345100 Sobic004G340900--Sobic009G159400 Sobic004G340900--Sobic002G017800 Sobic009G077800 Sobic009G077800 Sobic004G340900--Sobic009G077800 Sobic004G340900--Sobic010G259600 Sobic004G340900--Sobic001G389000 Sobic004G340900--Sobic005G018700 Sobic004G340900--Sobic004G321300 Sobic003G084400 Sobic003G084400 Sobic004G340900--Sobic003G084400 Sobic004G340900--Sobic005G196800
Octagon: transcription factors


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