Gene annotation
Transcriptome id Sobic.009G248500.1
Synonym Sb09g029910, SLAH2
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
C4-dicarboxylate transporter/malic acid transport protein, expressed
UniProt C5YWJ1
Pfam PF03595
Panther DB PTHR31269 PTHR31269:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0008308voltage-gated anion channel activity GO:0006873cellular ion homeostasis


Orthologs (automatic annotation)
TAIR AT4G27970 : SLAC1 homologue 2
RAP-DB (Rice) LOC_Os01g43460.1 : C4-dicarboxylate transporter/malic acid transport protein, expressed
MaizeGDB (Corn) Zm00025a043265 , Zm00025a044733 , Zm00025a037581 , Zm00025a036732 , Zm00025a038583 , Zm00025a025514 , Zm00025a010131 , Zm00025a028368
Brachypodium KQK04718 , KQK08799 , KQK03387 , KQJ84144 , KQK08801 , KQK08800 , PNT72420
Barley HORVU1Hr1G030060.8 , HORVU1Hr1G030060.9 , HORVU1Hr1G030060.2 , HORVU1Hr1G030060.6 , HORVU1Hr1G030060.4 , HORVU1Hr1G092740.1 , HORVU2Hr1G094450.2 , HORVU2Hr1G094450.3 , HORVU2Hr1G094450.1 , HORVU2Hr1G094450.4 , HORVU2Hr1G094450.5 , HORVU3Hr1G030850.1 , HORVU3Hr1G030850.3 , HORVU3Hr1G030850.2 , HORVU3Hr1G055740.12 , HORVU3Hr1G055740.4 , HORVU3Hr1G055740.5 , HORVU3Hr1G055740.6 , HORVU3Hr1G055740.7 , HORVU3Hr1G055740.1 , HORVU3Hr1G055740.3 , HORVU3Hr1G055740.8 , HORVU3Hr1G055740.9 , HORVU3Hr1G030840.2 , HORVU3Hr1G030840.3 , HORVU3Hr1G030840.1 , HORVU1Hr1G030060.10 , HORVU1Hr1G030060.11 , HORVU1Hr1G030060.12 , HORVU1Hr1G030060.13 , HORVU3Hr1G055740.10 , HORVU3Hr1G055740.11 , HORVU3Hr1G055740.2 , HORVU1Hr1G092640.6 , HORVU1Hr1G092640.7 , HORVU1Hr1G092640.4 , HORVU1Hr1G092640.5 , HORVU1Hr1G092640.2 , HORVU1Hr1G092640.3 , HORVU1Hr1G092640.1 , HORVU3Hr1G055740.14 , HORVU3Hr1G055740.15 , HORVU3Hr1G055740.13 , HORVU3Hr1G005540.3 , HORVU3Hr1G005540.2 , HORVU3Hr1G005540.1 , HORVU3Hr1G005540.4
Wheat TraesCSU02G001600 , TraesCS1D02G433200 , TraesCS1B02G456100 , TraesCS3B02G178600 , TraesCS1B02G456200 , TraesCS3D02G159600 , TraesCSU02G001400 , TraesCS2A02G398000 , TraesCS1B02G455100 , TraesCS3D02G228400 , TraesCS3A02G028100 , TraesCS3A02G151400 , TraesCS3D02G017800 , TraesCS2B02G416100 , TraesCS1B02G456300 , TraesCS3A02G225100 , TraesCS3B02G254700 , TraesCS1D02G432900 , TraesCS1B02G456400 , TraesCS2D02G395700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
2 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
3 Sobic.003G037800 transferase family protein, putative, expressed -
4 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.002G356101 - -
6 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
7 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
8 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
9 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
11 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -
12 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
13 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
14 Sobic.003G092900 expressed protein -
15 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
16 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
17 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
18 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
19 Sobic.003G125650 - K02183: calmodulin
20 Sobic.002G202600 joka8, putative, expressed -


Gene co-expression network
sample Sobic009G248500 Sobic009G248500 Sobic001G322200 Sobic001G322200 Sobic009G248500--Sobic001G322200 Sobic001G267600 Sobic001G267600 Sobic009G248500--Sobic001G267600 Sobic003G037800 Sobic003G037800 Sobic009G248500--Sobic003G037800 Sobic009G027900 Sobic009G027900 Sobic009G248500--Sobic009G027900 Sobic002G356101 Sobic002G356101 Sobic009G248500--Sobic002G356101 Sobic001G247300 Sobic001G247300 Sobic009G248500--Sobic001G247300 Sobic003G228900 Sobic003G228900 Sobic009G248500--Sobic003G228900 Sobic006G066200 Sobic006G066200 Sobic009G248500--Sobic006G066200 Sobic003G093000 Sobic003G093000 Sobic009G248500--Sobic003G093000 Sobic001G322200--Sobic009G248500 Sobic004G341800 Sobic004G341800 Sobic001G322200--Sobic004G341800 Sobic001G322200--Sobic009G027900 Sobic001G322200--Sobic001G267600 Sobic001G322200--Sobic003G228900 Sobic002G189100 Sobic002G189100 Sobic001G322200--Sobic002G189100 Sobic004G041900 Sobic004G041900 Sobic001G322200--Sobic004G041900 Sobic003G049700 Sobic003G049700 Sobic001G322200--Sobic003G049700 Sobic004G065500 Sobic004G065500 Sobic001G322200--Sobic004G065500 Sobic001G267600--Sobic003G093000 Sobic001G267600--Sobic002G189100 Sobic003G064200 Sobic003G064200 Sobic001G267600--Sobic003G064200 Sobic003G268600 Sobic003G268600 Sobic001G267600--Sobic003G268600 Sobic001G267600--Sobic001G247300 Sobic009G192600 Sobic009G192600 Sobic001G267600--Sobic009G192600 Sobic003G092900 Sobic003G092900 Sobic001G267600--Sobic003G092900 Sobic003G050300 Sobic003G050300 Sobic001G267600--Sobic003G050300 Sobic010G259300 Sobic010G259300 Sobic001G267600--Sobic010G259300 Sobic003G429000 Sobic003G429000 Sobic003G037800--Sobic003G429000 Sobic002G245100 Sobic002G245100 Sobic003G037800--Sobic002G245100 Sobic001G389000 Sobic001G389000 Sobic003G037800--Sobic001G389000 Sobic009G033700 Sobic009G033700 Sobic003G037800--Sobic009G033700 Sobic009G159400 Sobic009G159400 Sobic003G037800--Sobic009G159400 Sobic005G018700 Sobic005G018700 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic004G321300 Sobic004G321300 Sobic003G037800--Sobic004G321300 Sobic004G340900 Sobic004G340900 Sobic003G037800--Sobic004G340900 Sobic009G027900--Sobic009G248500 Sobic009G027900--Sobic001G322200 Sobic009G027900--Sobic006G066200 Sobic008G042900 Sobic008G042900 Sobic009G027900--Sobic008G042900 Sobic002G140300 Sobic002G140300 Sobic009G027900--Sobic002G140300 Sobic001G532200 Sobic001G532200 Sobic009G027900--Sobic001G532200 Sobic001G464900 Sobic001G464900 Sobic009G027900--Sobic001G464900 Sobic006G165100 Sobic006G165100 Sobic009G027900--Sobic006G165100 Sobic001G516600 Sobic001G516600 Sobic009G027900--Sobic001G516600 Sobic010G086200 Sobic010G086200 Sobic002G356101--Sobic010G086200 Sobic007G074000 Sobic007G074000 Sobic002G356101--Sobic007G074000 Sobic002G356101--Sobic004G065500 Sobic002G356101--Sobic001G247300 Sobic009G247900 Sobic009G247900 Sobic002G356101--Sobic009G247900 Sobic003G430400 Sobic003G430400 Sobic002G356101--Sobic003G430400 Sobic009G184000 Sobic009G184000 Sobic002G356101--Sobic009G184000 Sobic005G196800 Sobic005G196800 Sobic002G356101--Sobic005G196800 Sobic009G200700 Sobic009G200700 Sobic002G356101--Sobic009G200700 Sobic001G247300--Sobic005G196800 Sobic003G043600 Sobic003G043600 Sobic001G247300--Sobic003G043600 Sobic001G247300--Sobic003G092900 Sobic004G237800 Sobic004G237800 Sobic001G247300--Sobic004G237800 Sobic001G247300--Sobic009G184000 Sobic001G247300--Sobic006G183400 Sobic002G338500 Sobic002G338500 Sobic001G247300--Sobic002G338500 Sobic001G247300--Sobic007G074000 Sobic003G382600 Sobic003G382600 Sobic001G247300--Sobic003G382600 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic006G066200--Sobic003G430400 Sobic006G066200--Sobic002G140300 Sobic004G222500 Sobic004G222500 Sobic006G066200--Sobic004G222500 Sobic006G066200--Sobic009G247900 Sobic006G066200--Sobic004G341800 Sobic001G040200 Sobic001G040200 Sobic006G066200--Sobic001G040200 Sobic006G066200--Sobic003G092900 Sobic002G131800 Sobic002G131800 Sobic006G066200--Sobic002G131800 Sobic006G179500 Sobic006G179500 Sobic006G066200--Sobic006G179500 Sobic002G220000 Sobic002G220000 Sobic003G093000--Sobic002G220000 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic003G093000--Sobic004G191400 Sobic003G093000--Sobic003G228900 Sobic003G093000--Sobic009G122400 Sobic003G093000--Sobic010G259300
Octagon: transcription factors


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