Gene annotation
Transcriptome id Sobic.001G322200.1
Synonym Sb01g031250
Functional annotation hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5WUM4
Pfam PF12695
Panther DB PTHR10992 PTHR10992:SF809
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36290 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os10g37710.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053632 , Zm00025a053525 , Zm00025a003070
Brachypodium KQJ97498 , KQK23994
Barley HORVU1Hr1G048530.3 , HORVU1Hr1G048530.2 , HORVU1Hr1G048530.1 , HORVU1Hr1G048530.4
Wheat TraesCS1D02G187100 , TraesCS1D02G187200 , TraesCS1A02G189300 , TraesCS1B02G197000 , TraesCS1A02G189200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G248500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein, expressed -
2 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -
3 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
4 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
5 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
6 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
7 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
8 Sobic.003G049700 glyoxalase family protein, putative, expressed -
9 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
10 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
11 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
12 Sobic.007G192300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.002G356101 - -
14 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G471200 membrane protein, putative, expressed -
17 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
18 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
19 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
20 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -


Gene co-expression network
sample Sobic001G322200 Sobic001G322200 Sobic009G248500 Sobic009G248500 Sobic001G322200--Sobic009G248500 Sobic004G341800 Sobic004G341800 Sobic001G322200--Sobic004G341800 Sobic009G027900 Sobic009G027900 Sobic001G322200--Sobic009G027900 Sobic001G267600 Sobic001G267600 Sobic001G322200--Sobic001G267600 Sobic003G228900 Sobic003G228900 Sobic001G322200--Sobic003G228900 Sobic002G189100 Sobic002G189100 Sobic001G322200--Sobic002G189100 Sobic004G041900 Sobic004G041900 Sobic001G322200--Sobic004G041900 Sobic003G049700 Sobic003G049700 Sobic001G322200--Sobic003G049700 Sobic004G065500 Sobic004G065500 Sobic001G322200--Sobic004G065500 Sobic009G248500--Sobic001G322200 Sobic009G248500--Sobic001G267600 Sobic003G037800 Sobic003G037800 Sobic009G248500--Sobic003G037800 Sobic009G248500--Sobic009G027900 Sobic002G356101 Sobic002G356101 Sobic009G248500--Sobic002G356101 Sobic001G247300 Sobic001G247300 Sobic009G248500--Sobic001G247300 Sobic009G248500--Sobic003G228900 Sobic006G066200 Sobic006G066200 Sobic009G248500--Sobic006G066200 Sobic003G093000 Sobic003G093000 Sobic009G248500--Sobic003G093000 Sobic009G247900 Sobic009G247900 Sobic004G341800--Sobic009G247900 Sobic001G471200 Sobic001G471200 Sobic004G341800--Sobic001G471200 Sobic004G341800--Sobic001G322200 Sobic003G428700 Sobic003G428700 Sobic004G341800--Sobic003G428700 Sobic004G222500 Sobic004G222500 Sobic004G341800--Sobic004G222500 Sobic009G122400 Sobic009G122400 Sobic004G341800--Sobic009G122400 Sobic006G183400 Sobic006G183400 Sobic004G341800--Sobic006G183400 Sobic004G341800--Sobic003G228900 Sobic004G341800--Sobic002G189100 Sobic009G027900--Sobic009G248500 Sobic009G027900--Sobic001G322200 Sobic009G027900--Sobic006G066200 Sobic008G042900 Sobic008G042900 Sobic009G027900--Sobic008G042900 Sobic002G140300 Sobic002G140300 Sobic009G027900--Sobic002G140300 Sobic001G532200 Sobic001G532200 Sobic009G027900--Sobic001G532200 Sobic001G464900 Sobic001G464900 Sobic009G027900--Sobic001G464900 Sobic006G165100 Sobic006G165100 Sobic009G027900--Sobic006G165100 Sobic001G516600 Sobic001G516600 Sobic009G027900--Sobic001G516600 Sobic001G267600--Sobic003G093000 Sobic001G267600--Sobic002G189100 Sobic003G064200 Sobic003G064200 Sobic001G267600--Sobic003G064200 Sobic003G268600 Sobic003G268600 Sobic001G267600--Sobic003G268600 Sobic001G267600--Sobic001G247300 Sobic009G192600 Sobic009G192600 Sobic001G267600--Sobic009G192600 Sobic003G092900 Sobic003G092900 Sobic001G267600--Sobic003G092900 Sobic003G050300 Sobic003G050300 Sobic001G267600--Sobic003G050300 Sobic010G259300 Sobic010G259300 Sobic001G267600--Sobic010G259300 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic009G184000 Sobic009G184000 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic002G189100--Sobic003G228900 Sobic002G189100--Sobic003G093000 Sobic002G189100--Sobic009G192600 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic002G189100--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic002G189100--Sobic001G267600 Sobic004G041900--Sobic006G075400 Sobic004G041900--Sobic007G017500 Sobic003G043600 Sobic003G043600 Sobic004G041900--Sobic003G043600 Sobic001G330400 Sobic001G330400 Sobic004G041900--Sobic001G330400 Sobic004G041900--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic004G041900--Sobic001G318700 Sobic004G041900--Sobic003G228900 Sobic001G031700 Sobic001G031700 Sobic004G041900--Sobic001G031700 Sobic004G041900--Sobic003G268600 Sobic003G049700--Sobic004G191400 Sobic007G122800 Sobic007G122800 Sobic003G049700--Sobic007G122800 Sobic004G064500 Sobic004G064500 Sobic003G049700--Sobic004G064500 Sobic003G049700--Sobic009G192600 Sobic003G049700--Sobic002G189100 Sobic003G049700--Sobic003G228900 Sobic003G049700--Sobic001G267600 Sobic006G007900 Sobic006G007900 Sobic003G049700--Sobic006G007900 Sobic002G358300 Sobic002G358300 Sobic003G049700--Sobic002G358300 Sobic006G267200 Sobic006G267200 Sobic004G065500--Sobic006G267200 Sobic001G459800 Sobic001G459800 Sobic004G065500--Sobic001G459800 Sobic003G393900 Sobic003G393900 Sobic004G065500--Sobic003G393900 Sobic007G074000 Sobic007G074000 Sobic004G065500--Sobic007G074000 Sobic010G086200 Sobic010G086200 Sobic004G065500--Sobic010G086200 Sobic004G306300 Sobic004G306300 Sobic004G065500--Sobic004G306300 Sobic004G065500--Sobic003G228900 Sobic004G321300 Sobic004G321300 Sobic004G065500--Sobic004G321300 Sobic004G065500--Sobic009G247900
Octagon: transcription factors


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