Gene annotation
Transcriptome id Sobic.010G065900.1
Synonym Sb10g005690
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
formin-like protein 13, putative, expressed
UniProt C5Z5I8
Pfam PF10409
Panther DB PTHR23213 PTHR23213:SF190
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58160 : actin binding
RAP-DB (Rice) LOC_Os06g08540.2 : formin-like protein 13, putative, expressed
MaizeGDB (Corn) Zm00025a049772
Brachypodium -
Barley HORVU7Hr1G030310.8 , HORVU7Hr1G030310.6 , HORVU7Hr1G030310.7 , HORVU7Hr1G030310.4 , HORVU7Hr1G030310.5 , HORVU7Hr1G030310.2 , HORVU7Hr1G030310.3 , HORVU7Hr1G030310.1 , HORVU0Hr1G019600.1
Wheat TraesCS7B02G051900 , TraesCS7D02G150000 , TraesCS7D02G150000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
2 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
3 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
4 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
5 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
6 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
7 Sobic.004G318100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
8 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
9 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
11 Sobic.002G104900 B12D protein, putative, expressed -
12 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
13 Sobic.003G037800 transferase family protein, putative, expressed -
14 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
15 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
16 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
17 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
18 Sobic.010G086200 GRAM domain containing protein, expressed -
19 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
20 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -


Gene co-expression network
sample Sobic010G065900 Sobic010G065900 Sobic010G028200 Sobic010G028200 Sobic010G065900--Sobic010G028200 Sobic001G173300 Sobic001G173300 Sobic010G065900--Sobic001G173300 Sobic002G393400 Sobic002G393400 Sobic010G065900--Sobic002G393400 Sobic009G141800 Sobic009G141800 Sobic010G065900--Sobic009G141800 Sobic001G516600 Sobic001G516600 Sobic010G065900--Sobic001G516600 Sobic003G209000 Sobic003G209000 Sobic010G065900--Sobic003G209000 Sobic004G318100 Sobic004G318100 Sobic010G065900--Sobic004G318100 Sobic003G160700 Sobic003G160700 Sobic010G065900--Sobic003G160700 Sobic001G322200 Sobic001G322200 Sobic010G065900--Sobic001G322200 Sobic010G028200--Sobic003G209000 Sobic010G028200--Sobic010G065900 Sobic002G418400 Sobic002G418400 Sobic010G028200--Sobic002G418400 Sobic001G404800 Sobic001G404800 Sobic010G028200--Sobic001G404800 Sobic003G436700 Sobic003G436700 Sobic010G028200--Sobic003G436700 Sobic004G055700 Sobic004G055700 Sobic010G028200--Sobic004G055700 Sobic010G028200--Sobic003G160700 Sobic004G008400 Sobic004G008400 Sobic010G028200--Sobic004G008400 Sobic002G136700 Sobic002G136700 Sobic010G028200--Sobic002G136700 Sobic001G173300--Sobic001G516600 Sobic004G257300 Sobic004G257300 Sobic001G173300--Sobic004G257300 Sobic004G036600 Sobic004G036600 Sobic001G173300--Sobic004G036600 Sobic009G208800 Sobic009G208800 Sobic001G173300--Sobic009G208800 Sobic001G084100 Sobic001G084100 Sobic001G173300--Sobic001G084100 Sobic001G173300--Sobic010G065900 Sobic007G151100 Sobic007G151100 Sobic001G173300--Sobic007G151100 Sobic009G027900 Sobic009G027900 Sobic001G173300--Sobic009G027900 Sobic005G168100 Sobic005G168100 Sobic001G173300--Sobic005G168100 Sobic003G393900 Sobic003G393900 Sobic002G393400--Sobic003G393900 Sobic009G054800 Sobic009G054800 Sobic002G393400--Sobic009G054800 Sobic002G372400 Sobic002G372400 Sobic002G393400--Sobic002G372400 Sobic004G065500 Sobic004G065500 Sobic002G393400--Sobic004G065500 Sobic005G113300 Sobic005G113300 Sobic002G393400--Sobic005G113300 Sobic010G230700 Sobic010G230700 Sobic002G393400--Sobic010G230700 Sobic004G280700 Sobic004G280700 Sobic002G393400--Sobic004G280700 Sobic002G393400--Sobic004G008400 Sobic003G037800 Sobic003G037800 Sobic002G393400--Sobic003G037800 Sobic006G267200 Sobic006G267200 Sobic009G141800--Sobic006G267200 Sobic010G086200 Sobic010G086200 Sobic009G141800--Sobic010G086200 Sobic009G141800--Sobic003G393900 Sobic009G141800--Sobic004G065500 Sobic004G187900 Sobic004G187900 Sobic009G141800--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic009G141800--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic009G141800--Sobic009G008900 Sobic003G387000 Sobic003G387000 Sobic009G141800--Sobic003G387000 Sobic001G459800 Sobic001G459800 Sobic009G141800--Sobic001G459800 Sobic001G516600--Sobic001G173300 Sobic001G516600--Sobic007G151100 Sobic001G516600--Sobic003G037800 Sobic003G296700 Sobic003G296700 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic008G177800 Sobic008G177800 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic004G259200 Sobic004G259200 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic006G083500 Sobic006G083500 Sobic003G209000--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic003G209000--Sobic003G215700 Sobic007G051000 Sobic007G051000 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic002G398901 Sobic002G398901 Sobic003G209000--Sobic002G398901 Sobic004G318100--Sobic006G131400 Sobic004G318100--Sobic010G065900 Sobic004G318100--Sobic001G173300 Sobic004G318100--Sobic001G516600 Sobic003G357100 Sobic003G357100 Sobic004G318100--Sobic003G357100 Sobic004G318100--Sobic009G141800 Sobic004G318100--Sobic003G209000 Sobic009G217000 Sobic009G217000 Sobic004G318100--Sobic009G217000 Sobic001G351000 Sobic001G351000 Sobic004G318100--Sobic001G351000 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G125650 Sobic003G125650 Sobic003G160700--Sobic003G125650 Sobic003G078200 Sobic003G078200 Sobic003G160700--Sobic003G078200 Sobic001G475500 Sobic001G475500 Sobic003G160700--Sobic001G475500 Sobic001G502900 Sobic001G502900 Sobic003G160700--Sobic001G502900 Sobic004G220000 Sobic004G220000 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G160700--Sobic003G436700 Sobic009G248500 Sobic009G248500 Sobic001G322200--Sobic009G248500 Sobic004G341800 Sobic004G341800 Sobic001G322200--Sobic004G341800 Sobic001G322200--Sobic009G027900 Sobic001G267600 Sobic001G267600 Sobic001G322200--Sobic001G267600 Sobic003G228900 Sobic003G228900 Sobic001G322200--Sobic003G228900 Sobic002G189100 Sobic002G189100 Sobic001G322200--Sobic002G189100 Sobic001G322200--Sobic004G041900 Sobic003G049700 Sobic003G049700 Sobic001G322200--Sobic003G049700 Sobic001G322200--Sobic004G065500
Octagon: transcription factors


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