Gene annotation
Transcriptome id Sobic.004G318100.1
Synonym Sb04g034900, PYR6
Functional annotation adenylate kinase, putative, expressed
UniProt C5XTL6
Pfam PF13238
Panther DB PTHR23359 PTHR23359:SF91
NCBI CDD KOG3079; Uridylate kinase/adenylate kinase
KEGG Orthology K13800; CMPK1, UMP-CMP kinase
Gene Ontology GO:0006139; nucleobase-containing compound metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G26667 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g53790.1 : adenylate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a022343 , Zm00025a033033
Brachypodium KQK15102
Barley HORVU2Hr1G029350.1 , HORVU2Hr1G029350.3 , HORVU2Hr1G029350.2 , HORVU2Hr1G029350.5 , HORVU2Hr1G029350.4 , HORVU2Hr1G029350.7 , HORVU2Hr1G029350.6 , HORVU2Hr1G029350.9 , HORVU2Hr1G029350.8 , HORVU7Hr1G034340.9 , HORVU7Hr1G034340.8 , HORVU7Hr1G034340.5 , HORVU7Hr1G034340.4 , HORVU7Hr1G034340.7 , HORVU7Hr1G034340.6 , HORVU7Hr1G034340.1 , HORVU7Hr1G034340.3 , HORVU7Hr1G034340.2 , HORVU2Hr1G029350.11 , HORVU2Hr1G029350.10 , HORVU7Hr1G034340.19 , HORVU7Hr1G034340.18 , HORVU7Hr1G034340.11 , HORVU7Hr1G034340.13 , HORVU7Hr1G034340.12 , HORVU7Hr1G034340.15 , HORVU7Hr1G034340.14 , HORVU7Hr1G034340.17 , HORVU7Hr1G034340.16
Wheat TraesCS2B02G187300 , TraesCS2B02G187300 , TraesCS7B02G069300 , TraesCS2D02G168400 , TraesCS2D02G168400 , TraesCS7A02G163500 , TraesCS2B02G187300 , TraesCS7D02G165600 , TraesCS2A02G161300 , TraesCS2A02G161300
Populus -


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cDNA sequences
Sobic.004G318100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G131400 expressed protein -
2 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
3 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
4 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
5 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
6 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
7 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
8 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
9 Sobic.001G351000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
10 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
11 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
13 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
14 Sobic.003G306100 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
15 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
17 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
18 Sobic.009G186600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.010G023800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed K00800: 3-phosphoshikimate 1-carboxyvinyltransferase
20 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic004G318100 Sobic004G318100 Sobic006G131400 Sobic006G131400 Sobic004G318100--Sobic006G131400 Sobic010G065900 Sobic010G065900 Sobic004G318100--Sobic010G065900 Sobic001G173300 Sobic001G173300 Sobic004G318100--Sobic001G173300 Sobic001G516600 Sobic001G516600 Sobic004G318100--Sobic001G516600 Sobic003G357100 Sobic003G357100 Sobic004G318100--Sobic003G357100 Sobic009G141800 Sobic009G141800 Sobic004G318100--Sobic009G141800 Sobic003G209000 Sobic003G209000 Sobic004G318100--Sobic003G209000 Sobic009G217000 Sobic009G217000 Sobic004G318100--Sobic009G217000 Sobic001G351000 Sobic001G351000 Sobic004G318100--Sobic001G351000 Sobic006G131400--Sobic001G516600 Sobic003G094200 Sobic003G094200 Sobic006G131400--Sobic003G094200 Sobic002G343500 Sobic002G343500 Sobic006G131400--Sobic002G343500 Sobic003G285800 Sobic003G285800 Sobic006G131400--Sobic003G285800 Sobic009G033700 Sobic009G033700 Sobic006G131400--Sobic009G033700 Sobic006G131400--Sobic004G318100 Sobic009G129000 Sobic009G129000 Sobic006G131400--Sobic009G129000 Sobic001G107400 Sobic001G107400 Sobic006G131400--Sobic001G107400 Sobic004G036600 Sobic004G036600 Sobic006G131400--Sobic004G036600 Sobic010G028200 Sobic010G028200 Sobic010G065900--Sobic010G028200 Sobic010G065900--Sobic001G173300 Sobic002G393400 Sobic002G393400 Sobic010G065900--Sobic002G393400 Sobic010G065900--Sobic009G141800 Sobic010G065900--Sobic001G516600 Sobic010G065900--Sobic003G209000 Sobic010G065900--Sobic004G318100 Sobic003G160700 Sobic003G160700 Sobic010G065900--Sobic003G160700 Sobic001G322200 Sobic001G322200 Sobic010G065900--Sobic001G322200 Sobic001G173300--Sobic001G516600 Sobic004G257300 Sobic004G257300 Sobic001G173300--Sobic004G257300 Sobic001G173300--Sobic004G036600 Sobic009G208800 Sobic009G208800 Sobic001G173300--Sobic009G208800 Sobic001G084100 Sobic001G084100 Sobic001G173300--Sobic001G084100 Sobic001G173300--Sobic010G065900 Sobic007G151100 Sobic007G151100 Sobic001G173300--Sobic007G151100 Sobic009G027900 Sobic009G027900 Sobic001G173300--Sobic009G027900 Sobic005G168100 Sobic005G168100 Sobic001G173300--Sobic005G168100 Sobic001G516600--Sobic001G173300 Sobic001G516600--Sobic007G151100 Sobic003G037800 Sobic003G037800 Sobic001G516600--Sobic003G037800 Sobic003G296700 Sobic003G296700 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic001G516600--Sobic006G131400 Sobic008G177800 Sobic008G177800 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic001G389000 Sobic001G389000 Sobic003G357100--Sobic001G389000 Sobic005G103300 Sobic005G103300 Sobic003G357100--Sobic005G103300 Sobic003G357100--Sobic001G516600 Sobic009G159400 Sobic009G159400 Sobic003G357100--Sobic009G159400 Sobic001G115300 Sobic001G115300 Sobic003G357100--Sobic001G115300 Sobic002G082600 Sobic002G082600 Sobic003G357100--Sobic002G082600 Sobic002G104900 Sobic002G104900 Sobic003G357100--Sobic002G104900 Sobic009G179900 Sobic009G179900 Sobic003G357100--Sobic009G179900 Sobic001G119000 Sobic001G119000 Sobic003G357100--Sobic001G119000 Sobic006G267200 Sobic006G267200 Sobic009G141800--Sobic006G267200 Sobic010G086200 Sobic010G086200 Sobic009G141800--Sobic010G086200 Sobic003G393900 Sobic003G393900 Sobic009G141800--Sobic003G393900 Sobic004G065500 Sobic004G065500 Sobic009G141800--Sobic004G065500 Sobic004G187900 Sobic004G187900 Sobic009G141800--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic009G141800--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic009G141800--Sobic009G008900 Sobic003G387000 Sobic003G387000 Sobic009G141800--Sobic003G387000 Sobic001G459800 Sobic001G459800 Sobic009G141800--Sobic001G459800 Sobic004G259200 Sobic004G259200 Sobic003G209000--Sobic004G259200 Sobic001G404800 Sobic001G404800 Sobic003G209000--Sobic001G404800 Sobic002G418400 Sobic002G418400 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic006G083500 Sobic006G083500 Sobic003G209000--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic003G209000--Sobic003G215700 Sobic007G051000 Sobic007G051000 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic002G398901 Sobic002G398901 Sobic003G209000--Sobic002G398901 Sobic009G217000--Sobic004G036600 Sobic009G217000--Sobic003G094200 Sobic003G310700 Sobic003G310700 Sobic009G217000--Sobic003G310700 Sobic009G217000--Sobic010G065900 Sobic009G217000--Sobic006G131400 Sobic009G217000--Sobic004G065500 Sobic009G217000--Sobic009G141800 Sobic005G028700 Sobic005G028700 Sobic009G217000--Sobic005G028700 Sobic009G217000--Sobic006G267200 Sobic001G351000--Sobic004G065500 Sobic004G220000 Sobic004G220000 Sobic001G351000--Sobic004G220000 Sobic004G171400 Sobic004G171400 Sobic001G351000--Sobic004G171400 Sobic001G351000--Sobic001G459800 Sobic001G351000--Sobic006G267200 Sobic001G351000--Sobic009G141800 Sobic001G351000--Sobic003G393900 Sobic005G113300 Sobic005G113300 Sobic001G351000--Sobic005G113300 Sobic003G228900 Sobic003G228900 Sobic001G351000--Sobic003G228900
Octagon: transcription factors


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