Gene annotation
Transcriptome id Sobic.009G186600.1
Synonym RCI3A, Sb09g024590, RCI3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peroxidase precursor, putative, expressed
UniProt C5Z0E4
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF38
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G05260 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os05g42000.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048553 , Zm00025a040226 , Zm00025a011430 , Zm00025a025893 , Zm00025a042738 , Zm00025a044846 , Zm00025a044121
Brachypodium PNT70977 , PNT70979 , PNT70978 , KQJ82616 , KQK16275
Barley HORVU2Hr1G064460.5 , HORVU7Hr1G013470.1 , HORVU1Hr1G066450.1 , HORVU1Hr1G066450.2 , HORVU1Hr1G066450.3 , HORVU7Hr1G093400.1 , HORVU7Hr1G093400.2 , HORVU7Hr1G098110.8 , HORVU7Hr1G098110.6 , HORVU7Hr1G098110.7 , HORVU7Hr1G098110.5 , HORVU7Hr1G098110.2 , HORVU7Hr1G098110.1 , HORVU7Hr1G098110.4 , HORVU3Hr1G112040.1 , HORVU7Hr1G098110.3 , HORVU2Hr1G064460.4 , HORVU2Hr1G064460.2 , HORVU2Hr1G064460.3
Wheat TraesCS1B02G115900 , TraesCS1A02G104300 , TraesCS7A02G424100 , TraesCS1B02G142800 , TraesCS1B02G142800 , TraesCS2B02G317200 , TraesCS7D02G417400 , TraesCS1D02G130200 , TraesCS1D02G318800 , TraesCS1A02G124200 , TraesCS1A02G124200 , TraesCS7B02G325800 , TraesCS1D02G096400 , TraesCS1A02G319000 , TraesCS1B02G331300 , TraesCS2A02G301000 , TraesCS2D02G265400 , TraesCS2D02G299700 , TraesCS1D02G402200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
3 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
5 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
7 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
8 Sobic.010G178500 Expressed in drought and heat(PubMedID : 29862293)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
9 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
10 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
12 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
15 Sobic.005G093000 - -
16 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
17 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
18 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.010G136000 expressed protein -
20 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G186600 Sobic009G186600 Sobic001G435000 Sobic001G435000 Sobic009G186600--Sobic001G435000 Sobic010G066700 Sobic010G066700 Sobic009G186600--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic009G186600--Sobic009G183400 Sobic001G389000 Sobic001G389000 Sobic009G186600--Sobic001G389000 Sobic002G329000 Sobic002G329000 Sobic009G186600--Sobic002G329000 Sobic007G155000 Sobic007G155000 Sobic009G186600--Sobic007G155000 Sobic005G103300 Sobic005G103300 Sobic009G186600--Sobic005G103300 Sobic010G178500 Sobic010G178500 Sobic009G186600--Sobic010G178500 Sobic001G476500 Sobic001G476500 Sobic009G186600--Sobic001G476500 Sobic004G208700 Sobic004G208700 Sobic001G435000--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic001G435000--Sobic004G229800 Sobic009G159400 Sobic009G159400 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic003G345100 Sobic003G345100 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic001G435000--Sobic001G140900 Sobic007G057000 Sobic007G057000 Sobic010G066700--Sobic007G057000 Sobic009G139400 Sobic009G139400 Sobic010G066700--Sobic009G139400 Sobic007G155100 Sobic007G155100 Sobic010G066700--Sobic007G155100 Sobic010G136000 Sobic010G136000 Sobic010G066700--Sobic010G136000 Sobic002G034800 Sobic002G034800 Sobic010G066700--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic010G066700--Sobic001G119400 Sobic003G382600 Sobic003G382600 Sobic010G066700--Sobic003G382600 Sobic010G066700--Sobic007G155000 Sobic001G038900 Sobic001G038900 Sobic010G066700--Sobic001G038900 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic006G092500 Sobic006G092500 Sobic009G183400--Sobic006G092500 Sobic009G183400--Sobic001G038900 Sobic001G097600 Sobic001G097600 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic004G100700 Sobic004G100700 Sobic009G183400--Sobic004G100700 Sobic009G183400--Sobic001G140900 Sobic001G389000--Sobic009G159400 Sobic003G037800 Sobic003G037800 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic004G340900 Sobic004G340900 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G389000--Sobic001G038900 Sobic003G429000 Sobic003G429000 Sobic001G389000--Sobic003G429000 Sobic005G093000 Sobic005G093000 Sobic002G329000--Sobic005G093000 Sobic002G329000--Sobic003G429000 Sobic010G268400 Sobic010G268400 Sobic002G329000--Sobic010G268400 Sobic002G329000--Sobic001G389000 Sobic002G329000--Sobic007G155000 Sobic003G417350 Sobic003G417350 Sobic002G329000--Sobic003G417350 Sobic002G329000--Sobic003G037800 Sobic001G050100 Sobic001G050100 Sobic002G329000--Sobic001G050100 Sobic010G195500 Sobic010G195500 Sobic002G329000--Sobic010G195500 Sobic007G155000--Sobic001G435000 Sobic007G155000--Sobic004G208700 Sobic009G234100 Sobic009G234100 Sobic007G155000--Sobic009G234100 Sobic007G155000--Sobic009G159400 Sobic002G140400 Sobic002G140400 Sobic007G155000--Sobic002G140400 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic007G155000--Sobic010G066700 Sobic007G155000--Sobic010G259600 Sobic005G103300--Sobic002G414600 Sobic005G103500 Sobic005G103500 Sobic005G103300--Sobic005G103500 Sobic003G334600 Sobic003G334600 Sobic005G103300--Sobic003G334600 Sobic003G387000 Sobic003G387000 Sobic005G103300--Sobic003G387000 Sobic001G252300 Sobic001G252300 Sobic005G103300--Sobic001G252300 Sobic005G103300--Sobic001G097600 Sobic001G119000 Sobic001G119000 Sobic005G103300--Sobic001G119000 Sobic002G082600 Sobic002G082600 Sobic005G103300--Sobic002G082600 Sobic002G359300 Sobic002G359300 Sobic005G103300--Sobic002G359300 Sobic001G317000 Sobic001G317000 Sobic010G178500--Sobic001G317000 Sobic010G178500--Sobic002G140400 Sobic002G104900 Sobic002G104900 Sobic010G178500--Sobic002G104900 Sobic007G145600 Sobic007G145600 Sobic010G178500--Sobic007G145600 Sobic001G124600 Sobic001G124600 Sobic010G178500--Sobic001G124600 Sobic003G094200 Sobic003G094200 Sobic010G178500--Sobic003G094200 Sobic004G189400 Sobic004G189400 Sobic010G178500--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic010G178500--Sobic001G423800 Sobic002G263400 Sobic002G263400 Sobic010G178500--Sobic002G263400 Sobic001G476500--Sobic006G092500 Sobic001G476500--Sobic009G183400 Sobic003G417800 Sobic003G417800 Sobic001G476500--Sobic003G417800 Sobic002G287100 Sobic002G287100 Sobic001G476500--Sobic002G287100 Sobic001G476500--Sobic004G100700 Sobic009G240600 Sobic009G240600 Sobic001G476500--Sobic009G240600 Sobic001G476500--Sobic001G119400 Sobic003G033900 Sobic003G033900 Sobic001G476500--Sobic003G033900 Sobic001G500000 Sobic001G500000 Sobic001G476500--Sobic001G500000
Octagon: transcription factors


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