Gene annotation
Transcriptome id Sobic.001G084100.1,Sobic.001G084100.5,Sobic.001G084100.4,Sobic.001G084100.3,Sobic.001G084100.2
Synonym Sb01g007580
Functional annotation UDP-glucose 6-dehydrogenase 5 (PubMedID : 26186930)
UDP-glucose 6-dehydrogenase, putative, expressed
UniProt A0A1B6QHW7 , Q8LKT0 , A0A1B6QHX7 , A0A1B6QHY1
Pfam PF00984 PF03721 PF03720 PF00984 PF03721 PF00984 PF03720 PF03721
Panther DB PTHR11374 PTHR11374:SF28
NCBI CDD -
KEGG Orthology K00012; UGDH, UDPglucose 6-dehydrogenase
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor


Orthologs (automatic annotation)
TAIR AT3G29360 : UDP-glucose 6-dehydrogenase family protein
RAP-DB (Rice) LOC_Os12g25700.2,LOC_Os12g25700.1 : UDP-glucose 6-dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a016771 , Zm00025a008224 , Zm00025a007220
Brachypodium KQK13517 , KQK13516 , KQK13515 , KQK13514 , KQJ89369 , KQK13108 , PNT74230 , PNT74231
Barley HORVU4Hr1G021270.4 , HORVU4Hr1G021270.1 , HORVU4Hr1G021270.2 , HORVU4Hr1G021270.3 , HORVU4Hr1G008270.1 , HORVU4Hr1G008270.3 , HORVU4Hr1G008270.5 , HORVU4Hr1G008270.4 , HORVU4Hr1G008270.7 , HORVU4Hr1G008270.6 , HORVU4Hr1G008270.9 , HORVU4Hr1G008270.8 , HORVU4Hr1G008270.10 , HORVU5Hr1G096370.4 , HORVU5Hr1G096370.5 , HORVU5Hr1G096370.2 , HORVU5Hr1G096370.3 , HORVU5Hr1G096370.1
Wheat TraesCS4D02G050600
Populus -


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cDNA sequences
Sobic.001G084100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
2 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
3 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
4 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
5 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
6 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
7 Sobic.003G119500 expressed protein -
8 Sobic.003G219800 transferase family protein, putative, expressed -
9 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
10 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
11 Sobic.002G128800 fiber protein Fb34, putative, expressed -
12 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
13 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
14 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase
15 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1
16 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
17 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
18 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
19 Sobic.003G037800 transferase family protein, putative, expressed -
20 Sobic.001G389700 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G084100 Sobic001G084100 Sobic001G532200 Sobic001G532200 Sobic001G084100--Sobic001G532200 Sobic001G173300 Sobic001G173300 Sobic001G084100--Sobic001G173300 Sobic006G156000 Sobic006G156000 Sobic001G084100--Sobic006G156000 Sobic010G052200 Sobic010G052200 Sobic001G084100--Sobic010G052200 Sobic005G168100 Sobic005G168100 Sobic001G084100--Sobic005G168100 Sobic004G212300 Sobic004G212300 Sobic001G084100--Sobic004G212300 Sobic003G119500 Sobic003G119500 Sobic001G084100--Sobic003G119500 Sobic003G219800 Sobic003G219800 Sobic001G084100--Sobic003G219800 Sobic001G418100 Sobic001G418100 Sobic001G084100--Sobic001G418100 Sobic001G516600 Sobic001G516600 Sobic001G532200--Sobic001G516600 Sobic001G532200--Sobic001G084100 Sobic001G532200--Sobic004G212300 Sobic001G513700 Sobic001G513700 Sobic001G532200--Sobic001G513700 Sobic009G248500 Sobic009G248500 Sobic001G532200--Sobic009G248500 Sobic007G151100 Sobic007G151100 Sobic001G532200--Sobic007G151100 Sobic001G532200--Sobic010G052200 Sobic009G073300 Sobic009G073300 Sobic001G532200--Sobic009G073300 Sobic009G027900 Sobic009G027900 Sobic001G532200--Sobic009G027900 Sobic001G173300--Sobic001G516600 Sobic004G257300 Sobic004G257300 Sobic001G173300--Sobic004G257300 Sobic004G036600 Sobic004G036600 Sobic001G173300--Sobic004G036600 Sobic009G208800 Sobic009G208800 Sobic001G173300--Sobic009G208800 Sobic001G173300--Sobic001G084100 Sobic010G065900 Sobic010G065900 Sobic001G173300--Sobic010G065900 Sobic001G173300--Sobic007G151100 Sobic001G173300--Sobic009G027900 Sobic001G173300--Sobic005G168100 Sobic003G443300 Sobic003G443300 Sobic006G156000--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic006G156000--Sobic001G432000 Sobic006G156000--Sobic005G168100 Sobic006G156000--Sobic003G219800 Sobic006G156000--Sobic001G084100 Sobic001G304400 Sobic001G304400 Sobic006G156000--Sobic001G304400 Sobic009G212200 Sobic009G212200 Sobic006G156000--Sobic009G212200 Sobic002G361700 Sobic002G361700 Sobic006G156000--Sobic002G361700 Sobic001G040100 Sobic001G040100 Sobic006G156000--Sobic001G040100 Sobic010G052200--Sobic004G212300 Sobic010G052200--Sobic001G084100 Sobic010G052200--Sobic001G532200 Sobic002G128800 Sobic002G128800 Sobic010G052200--Sobic002G128800 Sobic007G124301 Sobic007G124301 Sobic010G052200--Sobic007G124301 Sobic010G252401 Sobic010G252401 Sobic010G052200--Sobic010G252401 Sobic003G037800 Sobic003G037800 Sobic010G052200--Sobic003G037800 Sobic005G113300 Sobic005G113300 Sobic010G052200--Sobic005G113300 Sobic010G052200--Sobic006G156000 Sobic009G232900 Sobic009G232900 Sobic005G168100--Sobic009G232900 Sobic005G168100--Sobic001G432000 Sobic005G168100--Sobic006G156000 Sobic003G155400 Sobic003G155400 Sobic005G168100--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic005G168100--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic005G168100--Sobic002G296200 Sobic002G418400 Sobic002G418400 Sobic005G168100--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic005G168100--Sobic003G215700 Sobic003G150000 Sobic003G150000 Sobic005G168100--Sobic003G150000 Sobic004G212300--Sobic010G052200 Sobic004G212300--Sobic001G532200 Sobic004G212300--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic004G212300--Sobic004G062500 Sobic004G212300--Sobic001G084100 Sobic004G212300--Sobic001G516600 Sobic004G212300--Sobic006G156000 Sobic002G040600 Sobic002G040600 Sobic004G212300--Sobic002G040600 Sobic010G252500 Sobic010G252500 Sobic004G212300--Sobic010G252500 Sobic010G212500 Sobic010G212500 Sobic003G119500--Sobic010G212500 Sobic003G311800 Sobic003G311800 Sobic003G119500--Sobic003G311800 Sobic002G003800 Sobic002G003800 Sobic003G119500--Sobic002G003800 Sobic009G109000 Sobic009G109000 Sobic003G119500--Sobic009G109000 Sobic001G049900 Sobic001G049900 Sobic003G119500--Sobic001G049900 Sobic006G274933 Sobic006G274933 Sobic003G119500--Sobic006G274933 Sobic004G348800 Sobic004G348800 Sobic003G119500--Sobic004G348800 Sobic004G297900 Sobic004G297900 Sobic003G119500--Sobic004G297900 Sobic010G085800 Sobic010G085800 Sobic003G119500--Sobic010G085800 Sobic003G219800--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic003G219800--Sobic001G040100 Sobic005G112800 Sobic005G112800 Sobic003G219800--Sobic005G112800 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic001G418100--Sobic003G219800 Sobic001G418100--Sobic005G112800 Sobic002G396400 Sobic002G396400 Sobic001G418100--Sobic002G396400 Sobic001G418100--Sobic009G181800 Sobic002G154600 Sobic002G154600 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G475500 Sobic001G475500 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100
Octagon: transcription factors


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