Gene annotation
Transcriptome id Sobic.002G128800.1
Synonym Sb02g011110
Functional annotation fiber protein Fb34, putative, expressed
UniProt C5X5R8
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15480 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os07g27810.1 : fiber protein Fb34, putative, expressed
MaizeGDB (Corn) Zm00025a045873 , Zm00025a013539
Brachypodium KQK16382
Barley -
Wheat TraesCS2D02G562500 , TraesCS2B02G592000 , TraesCS3A02G415300 , TraesCS3D02G411100
Populus -


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cDNA sequences
Sobic.002G128800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
2 Sobic.007G150800 expressed protein -
3 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
4 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
5 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
6 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
7 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
8 Sobic.003G219800 transferase family protein, putative, expressed -
9 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
10 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
11 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
12 Sobic.009G212200 expressed protein -
13 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
14 Sobic.001G304400 expressed protein -
15 Sobic.003G410800 exostosin family domain containing protein, expressed -
16 Sobic.009G220100 exostosin family domain containing protein, expressed -
17 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
18 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
19 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
20 Sobic.006G278100 expressed protein -


Gene co-expression network
sample Sobic002G128800 Sobic002G128800 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic001G418100 Sobic001G418100 Sobic002G128800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G128800--Sobic002G396400 Sobic001G475500 Sobic001G475500 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic006G156000 Sobic006G156000 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic002G252000--Sobic001G418100 Sobic002G252000--Sobic002G396400 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic002G252000--Sobic003G443300 Sobic002G252000--Sobic003G219800 Sobic007G150800--Sobic001G475500 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic006G278100 Sobic006G278100 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic003G122200 Sobic003G122200 Sobic007G150800--Sobic003G122200 Sobic009G173500 Sobic009G173500 Sobic007G150800--Sobic009G173500 Sobic003G011100 Sobic003G011100 Sobic007G150800--Sobic003G011100 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic001G418100--Sobic002G396400 Sobic009G181800 Sobic009G181800 Sobic001G418100--Sobic009G181800 Sobic002G154600 Sobic002G154600 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic002G396400--Sobic001G418100 Sobic002G396400--Sobic001G038300 Sobic002G396400--Sobic001G475500 Sobic001G409100 Sobic001G409100 Sobic002G396400--Sobic001G409100 Sobic002G396400--Sobic002G128800 Sobic009G232100 Sobic009G232100 Sobic002G396400--Sobic009G232100 Sobic002G396400--Sobic002G154600 Sobic002G396400--Sobic009G181800 Sobic009G088900 Sobic009G088900 Sobic002G396400--Sobic009G088900 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic003G160700 Sobic003G160700 Sobic001G475500--Sobic003G160700 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic001G475500--Sobic007G150800 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic004G212300 Sobic004G212300 Sobic010G052200--Sobic004G212300 Sobic001G084100 Sobic001G084100 Sobic010G052200--Sobic001G084100 Sobic001G532200 Sobic001G532200 Sobic010G052200--Sobic001G532200 Sobic010G052200--Sobic002G128800 Sobic007G124301 Sobic007G124301 Sobic010G052200--Sobic007G124301 Sobic010G252401 Sobic010G252401 Sobic010G052200--Sobic010G252401 Sobic003G037800 Sobic003G037800 Sobic010G052200--Sobic003G037800 Sobic010G052200--Sobic005G113300 Sobic010G052200--Sobic006G156000 Sobic006G156000--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic006G156000--Sobic001G432000 Sobic005G168100 Sobic005G168100 Sobic006G156000--Sobic005G168100 Sobic006G156000--Sobic003G219800 Sobic006G156000--Sobic001G084100 Sobic001G304400 Sobic001G304400 Sobic006G156000--Sobic001G304400 Sobic006G156000--Sobic009G212200 Sobic002G361700 Sobic002G361700 Sobic006G156000--Sobic002G361700 Sobic001G040100 Sobic001G040100 Sobic006G156000--Sobic001G040100 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic003G443300--Sobic001G304400 Sobic001G418900 Sobic001G418900 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic006G216600 Sobic006G216600 Sobic003G443300--Sobic006G216600 Sobic003G443300--Sobic006G156000 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G443300--Sobic003G219800
Octagon: transcription factors


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