Gene annotation
Transcriptome id Sobic.009G220100.1
Synonym Sb09g027440, GUT1
Functional annotation exostosin family domain containing protein, expressed
UniProt C5YUZ6
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF102
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61840 : Exostosin family protein
RAP-DB (Rice) LOC_Os01g70200.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042790 , Zm00025a044448 , Zm00025a039237 , Zm00025a026203 , Zm00025a026205 , Zm00025a036519
Brachypodium KQK11315 , KQK11314
Barley HORVU3Hr1G096210.2 , HORVU3Hr1G096210.1 , HORVU3Hr1G096210.7 , HORVU3Hr1G096210.6 , HORVU3Hr1G096210.5 , HORVU3Hr1G096210.4 , HORVU3Hr1G096210.9 , HORVU3Hr1G096210.8 , HORVU3Hr1G096210.11 , HORVU3Hr1G096210.10
Wheat TraesCS3B02G474900 , TraesCS3B02G474900 , TraesCS3D02G433400 , TraesCS3D02G433400 , TraesCS3A02G440800
Populus -


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cDNA sequences
Sobic.009G220100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
2 Sobic.003G410800 exostosin family domain containing protein, expressed -
3 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
4 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
5 Sobic.003G219800 transferase family protein, putative, expressed -
6 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
8 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
9 Sobic.002G128800 fiber protein Fb34, putative, expressed -
10 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
11 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
12 Sobic.004G062500 "4-coumaroyl-CoA synthetase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Brown midrib2 (Bmr2) encodes the major 4-coumarate:coenzyme A ligase involved in lignin biosynthesis(PubMedID : 22313236)@4-Coumarate: Coenzyme A Ligase (4CL)(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
13 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
14 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
15 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
16 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
17 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
18 Sobic.001G434300 expressed protein -
19 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
20 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic009G220100 Sobic009G220100 Sobic010G238800 Sobic010G238800 Sobic009G220100--Sobic010G238800 Sobic003G410800 Sobic003G410800 Sobic009G220100--Sobic003G410800 Sobic001G418100 Sobic001G418100 Sobic009G220100--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic009G220100--Sobic009G181800 Sobic003G219800 Sobic003G219800 Sobic009G220100--Sobic003G219800 Sobic001G409100 Sobic001G409100 Sobic009G220100--Sobic001G409100 Sobic002G396400 Sobic002G396400 Sobic009G220100--Sobic002G396400 Sobic004G221300 Sobic004G221300 Sobic009G220100--Sobic004G221300 Sobic002G128800 Sobic002G128800 Sobic009G220100--Sobic002G128800 Sobic010G238800--Sobic009G220100 Sobic006G156000 Sobic006G156000 Sobic010G238800--Sobic006G156000 Sobic010G052200 Sobic010G052200 Sobic010G238800--Sobic010G052200 Sobic003G344600 Sobic003G344600 Sobic010G238800--Sobic003G344600 Sobic008G103700 Sobic008G103700 Sobic010G238800--Sobic008G103700 Sobic003G443300 Sobic003G443300 Sobic010G238800--Sobic003G443300 Sobic010G238800--Sobic002G128800 Sobic005G168100 Sobic005G168100 Sobic010G238800--Sobic005G168100 Sobic001G084100 Sobic001G084100 Sobic010G238800--Sobic001G084100 Sobic003G410800--Sobic009G220100 Sobic003G410800--Sobic001G409100 Sobic003G410800--Sobic001G418100 Sobic003G410800--Sobic002G396400 Sobic002G154600 Sobic002G154600 Sobic003G410800--Sobic002G154600 Sobic003G410800--Sobic004G221300 Sobic009G034300 Sobic009G034300 Sobic003G410800--Sobic009G034300 Sobic003G410800--Sobic002G128800 Sobic003G410800--Sobic010G052200 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic001G418100--Sobic002G396400 Sobic001G418100--Sobic009G181800 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G475500 Sobic001G475500 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic009G181800--Sobic001G418100 Sobic009G181800--Sobic003G219800 Sobic010G252401 Sobic010G252401 Sobic009G181800--Sobic010G252401 Sobic008G186100 Sobic008G186100 Sobic009G181800--Sobic008G186100 Sobic005G113300 Sobic005G113300 Sobic009G181800--Sobic005G113300 Sobic003G027400 Sobic003G027400 Sobic009G181800--Sobic003G027400 Sobic002G393400 Sobic002G393400 Sobic009G181800--Sobic002G393400 Sobic002G250000 Sobic002G250000 Sobic009G181800--Sobic002G250000 Sobic004G310200 Sobic004G310200 Sobic009G181800--Sobic004G310200 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic001G040100 Sobic001G040100 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic001G409100--Sobic002G396400 Sobic001G409100--Sobic003G410800 Sobic001G409100--Sobic004G221300 Sobic006G036400 Sobic006G036400 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G224300 Sobic001G224300 Sobic001G409100--Sobic001G224300 Sobic001G038300 Sobic001G038300 Sobic001G409100--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic001G409100--Sobic010G180100 Sobic001G409100--Sobic009G220100 Sobic002G396400--Sobic001G418100 Sobic002G396400--Sobic001G038300 Sobic002G396400--Sobic001G475500 Sobic002G396400--Sobic001G409100 Sobic002G396400--Sobic002G128800 Sobic009G232100 Sobic009G232100 Sobic002G396400--Sobic009G232100 Sobic002G396400--Sobic002G154600 Sobic002G396400--Sobic009G181800 Sobic009G088900 Sobic009G088900 Sobic002G396400--Sobic009G088900 Sobic001G360800 Sobic001G360800 Sobic004G221300--Sobic001G360800 Sobic004G221300--Sobic009G034300 Sobic004G221300--Sobic001G409100 Sobic004G221300--Sobic003G410800 Sobic003G296400 Sobic003G296400 Sobic004G221300--Sobic003G296400 Sobic008G110200 Sobic008G110200 Sobic004G221300--Sobic008G110200 Sobic004G221300--Sobic001G224300 Sobic004G221300--Sobic009G220100 Sobic004G221300--Sobic006G036400 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic002G128800--Sobic003G219800 Sobic002G128800--Sobic003G443300
Octagon: transcription factors


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