Gene annotation
Transcriptome id Sobic.001G434300.1
Synonym Sb01g040850
Functional annotation expressed protein
UniProt C5WQV7
Pfam -
Panther DB PTHR37726 PTHR37726:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41610 : -
RAP-DB (Rice) LOC_Os03g14880.1 : expressed protein
MaizeGDB (Corn) Zm00025a052861 , Zm00025a001617
Brachypodium KQJ96425 , KQK22529 , PNT67235
Barley HORVU4Hr1G062500.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
2 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
3 Sobic.003G219800 transferase family protein, putative, expressed -
4 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
5 Sobic.003G316000 expressed protein -
6 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.005G061200 dirigent, putative, expressed -
8 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
9 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
10 Sobic.008G055100 dirigent, putative, expressed -
11 Sobic.006G203700 EF hand family protein, putative, expressed -
12 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.004G252800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
15 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.001G455700 ATMAP70 protein, putative, expressed -
18 Sobic.002G411900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@SRC2 protein, putative, expressed -
19 Sobic.008G005100 PMR5, putative, expressed -
20 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G434300 Sobic001G434300 Sobic002G154600 Sobic002G154600 Sobic001G434300--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic001G434300--Sobic007G218800 Sobic003G219800 Sobic003G219800 Sobic001G434300--Sobic003G219800 Sobic001G038300 Sobic001G038300 Sobic001G434300--Sobic001G038300 Sobic003G316000 Sobic003G316000 Sobic001G434300--Sobic003G316000 Sobic001G310300 Sobic001G310300 Sobic001G434300--Sobic001G310300 Sobic005G061200 Sobic005G061200 Sobic001G434300--Sobic005G061200 Sobic009G181800 Sobic009G181800 Sobic001G434300--Sobic009G181800 Sobic001G418100 Sobic001G418100 Sobic001G434300--Sobic001G418100 Sobic002G154600--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic002G154600--Sobic002G261500 Sobic001G430100 Sobic001G430100 Sobic002G154600--Sobic001G430100 Sobic009G088900 Sobic009G088900 Sobic002G154600--Sobic009G088900 Sobic008G055100 Sobic008G055100 Sobic002G154600--Sobic008G055100 Sobic002G183700 Sobic002G183700 Sobic002G154600--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic002G154600--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic002G154600--Sobic004G297900 Sobic003G121100 Sobic003G121100 Sobic002G154600--Sobic003G121100 Sobic007G218800--Sobic008G055100 Sobic007G218800--Sobic002G154600 Sobic007G176000 Sobic007G176000 Sobic007G218800--Sobic007G176000 Sobic010G252500 Sobic010G252500 Sobic007G218800--Sobic010G252500 Sobic007G218800--Sobic009G088900 Sobic007G218800--Sobic003G311800 Sobic007G218800--Sobic001G430100 Sobic001G049900 Sobic001G049900 Sobic007G218800--Sobic001G049900 Sobic010G085800 Sobic010G085800 Sobic007G218800--Sobic010G085800 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic006G156000 Sobic006G156000 Sobic003G219800--Sobic006G156000 Sobic003G443300 Sobic003G443300 Sobic003G219800--Sobic003G443300 Sobic001G040100 Sobic001G040100 Sobic003G219800--Sobic001G040100 Sobic005G112800 Sobic005G112800 Sobic003G219800--Sobic005G112800 Sobic005G113300 Sobic005G113300 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic002G396400 Sobic002G396400 Sobic001G038300--Sobic002G396400 Sobic001G107100 Sobic001G107100 Sobic001G038300--Sobic001G107100 Sobic003G250700 Sobic003G250700 Sobic001G038300--Sobic003G250700 Sobic001G038300--Sobic001G418100 Sobic010G047600 Sobic010G047600 Sobic001G038300--Sobic010G047600 Sobic001G038300--Sobic001G434300 Sobic001G475500 Sobic001G475500 Sobic001G038300--Sobic001G475500 Sobic007G150800 Sobic007G150800 Sobic001G038300--Sobic007G150800 Sobic003G122200 Sobic003G122200 Sobic001G038300--Sobic003G122200 Sobic003G016100 Sobic003G016100 Sobic003G316000--Sobic003G016100 Sobic003G079400 Sobic003G079400 Sobic003G316000--Sobic003G079400 Sobic006G150700 Sobic006G150700 Sobic003G316000--Sobic006G150700 Sobic004G046200 Sobic004G046200 Sobic003G316000--Sobic004G046200 Sobic007G178900 Sobic007G178900 Sobic003G316000--Sobic007G178900 Sobic002G318100 Sobic002G318100 Sobic003G316000--Sobic002G318100 Sobic003G316000--Sobic007G176000 Sobic009G035300 Sobic009G035300 Sobic003G316000--Sobic009G035300 Sobic004G042000 Sobic004G042000 Sobic003G316000--Sobic004G042000 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G514200 Sobic001G514200 Sobic001G310300--Sobic001G514200 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic009G109000 Sobic009G109000 Sobic001G310300--Sobic009G109000 Sobic010G008400 Sobic010G008400 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic005G061200--Sobic009G088900 Sobic005G061200--Sobic007G176000 Sobic005G061200--Sobic002G154600 Sobic001G261460 Sobic001G261460 Sobic005G061200--Sobic001G261460 Sobic005G061200--Sobic001G514200 Sobic005G061200--Sobic007G218800 Sobic005G061200--Sobic008G055100 Sobic005G061200--Sobic007G178900 Sobic005G061200--Sobic002G261500 Sobic009G181800--Sobic001G418100 Sobic009G181800--Sobic003G219800 Sobic010G252401 Sobic010G252401 Sobic009G181800--Sobic010G252401 Sobic008G186100 Sobic008G186100 Sobic009G181800--Sobic008G186100 Sobic009G181800--Sobic005G113300 Sobic003G027400 Sobic003G027400 Sobic009G181800--Sobic003G027400 Sobic002G393400 Sobic002G393400 Sobic009G181800--Sobic002G393400 Sobic002G250000 Sobic002G250000 Sobic009G181800--Sobic002G250000 Sobic004G310200 Sobic004G310200 Sobic009G181800--Sobic004G310200 Sobic001G418100--Sobic003G219800 Sobic001G418100--Sobic005G112800 Sobic001G418100--Sobic002G396400 Sobic001G418100--Sobic009G181800 Sobic001G418100--Sobic002G154600 Sobic001G418100--Sobic001G514200 Sobic002G128800 Sobic002G128800 Sobic001G418100--Sobic002G128800 Sobic001G418100--Sobic001G475500 Sobic001G418100--Sobic008G055100
Octagon: transcription factors


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