Gene annotation
Transcriptome id Sobic.003G117500.1
Synonym RALFL33, Sb03g009900
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt C5XFV5
Pfam PF05498
Panther DB PTHR33136 PTHR33136:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15800 : ralf-like 33
RAP-DB (Rice) LOC_Os01g15320.1 : RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) Zm00025a036259 , Zm00025a049122 , Zm00025a024512 , Zm00025a023961 , Zm00025a035314
Brachypodium KQK03687 , KQK14706
Barley HORVU3Hr1G035650.1 , HORVU3Hr1G035650.2 , HORVU3Hr1G035650.3
Wheat -
Populus -


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cDNA sequences
Sobic.003G117500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
2 Sobic.003G027400 VQ domain containing protein, putative, expressed -
3 Sobic.001G481000 expressed protein -
4 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.007G150800 expressed protein -
6 Sobic.001G434300 expressed protein -
7 Sobic.003G219800 transferase family protein, putative, expressed -
8 Sobic.002G350500 AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
10 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
11 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
12 Sobic.003G321200 pectinesterase, putative, expressed K01051: pectinesterase
13 Sobic.001G111000 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
14 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
15 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
16 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
17 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
18 Sobic.003G016100 expressed protein -
19 Sobic.002G347500 expressed protein -
20 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other


Gene co-expression network
sample Sobic003G117500 Sobic003G117500 Sobic001G475500 Sobic001G475500 Sobic003G117500--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic003G117500--Sobic003G027400 Sobic001G481000 Sobic001G481000 Sobic003G117500--Sobic001G481000 Sobic001G310300 Sobic001G310300 Sobic003G117500--Sobic001G310300 Sobic007G150800 Sobic007G150800 Sobic003G117500--Sobic007G150800 Sobic001G434300 Sobic001G434300 Sobic003G117500--Sobic001G434300 Sobic003G219800 Sobic003G219800 Sobic003G117500--Sobic003G219800 Sobic002G350500 Sobic002G350500 Sobic003G117500--Sobic002G350500 Sobic001G502900 Sobic001G502900 Sobic003G117500--Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic003G160700 Sobic003G160700 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic001G475500--Sobic003G117500 Sobic003G027400--Sobic003G160700 Sobic006G249300 Sobic006G249300 Sobic003G027400--Sobic006G249300 Sobic009G248100 Sobic009G248100 Sobic003G027400--Sobic009G248100 Sobic010G221300 Sobic010G221300 Sobic003G027400--Sobic010G221300 Sobic003G027400--Sobic001G481000 Sobic003G027400--Sobic005G113300 Sobic002G387900 Sobic002G387900 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic001G304100 Sobic001G304100 Sobic001G481000--Sobic001G304100 Sobic001G481000--Sobic001G310300 Sobic010G184800 Sobic010G184800 Sobic001G481000--Sobic010G184800 Sobic004G203700 Sobic004G203700 Sobic001G481000--Sobic004G203700 Sobic009G188000 Sobic009G188000 Sobic001G481000--Sobic009G188000 Sobic001G481000--Sobic003G027400 Sobic003G321200 Sobic003G321200 Sobic001G481000--Sobic003G321200 Sobic002G213600 Sobic002G213600 Sobic001G481000--Sobic002G213600 Sobic001G481000--Sobic003G160700 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic010G085800 Sobic010G085800 Sobic001G310300--Sobic010G085800 Sobic001G514200 Sobic001G514200 Sobic001G310300--Sobic001G514200 Sobic008G055100 Sobic008G055100 Sobic001G310300--Sobic008G055100 Sobic001G310300--Sobic001G481000 Sobic009G109000 Sobic009G109000 Sobic001G310300--Sobic009G109000 Sobic010G008400 Sobic010G008400 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic001G310300--Sobic003G160700 Sobic007G150800--Sobic001G475500 Sobic002G128800 Sobic002G128800 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic006G278100 Sobic006G278100 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic007G150800--Sobic003G122200 Sobic007G150800--Sobic009G173500 Sobic003G011100 Sobic003G011100 Sobic007G150800--Sobic003G011100 Sobic002G154600 Sobic002G154600 Sobic001G434300--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic001G434300--Sobic007G218800 Sobic001G434300--Sobic003G219800 Sobic001G038300 Sobic001G038300 Sobic001G434300--Sobic001G038300 Sobic003G316000 Sobic003G316000 Sobic001G434300--Sobic003G316000 Sobic001G434300--Sobic001G310300 Sobic005G061200 Sobic005G061200 Sobic001G434300--Sobic005G061200 Sobic009G181800 Sobic009G181800 Sobic001G434300--Sobic009G181800 Sobic001G418100 Sobic001G418100 Sobic001G434300--Sobic001G418100 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic003G219800--Sobic001G444800 Sobic006G156000 Sobic006G156000 Sobic003G219800--Sobic006G156000 Sobic003G443300 Sobic003G443300 Sobic003G219800--Sobic003G443300 Sobic001G040100 Sobic001G040100 Sobic003G219800--Sobic001G040100 Sobic005G112800 Sobic005G112800 Sobic003G219800--Sobic005G112800 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic006G137800 Sobic006G137800 Sobic002G350500--Sobic006G137800 Sobic003G364300 Sobic003G364300 Sobic002G350500--Sobic003G364300 Sobic010G156500 Sobic010G156500 Sobic002G350500--Sobic010G156500 Sobic002G350500--Sobic004G203700 Sobic009G159400 Sobic009G159400 Sobic002G350500--Sobic009G159400 Sobic001G435000 Sobic001G435000 Sobic002G350500--Sobic001G435000 Sobic002G389400 Sobic002G389400 Sobic002G350500--Sobic002G389400 Sobic001G529400 Sobic001G529400 Sobic002G350500--Sobic001G529400 Sobic002G350500--Sobic003G027400 Sobic001G502900--Sobic001G475500 Sobic001G502900--Sobic003G160700 Sobic001G502900--Sobic005G113300 Sobic003G078200 Sobic003G078200 Sobic001G502900--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic001G502900--Sobic001G018900 Sobic001G502900--Sobic004G220000 Sobic003G125650 Sobic003G125650 Sobic001G502900--Sobic003G125650 Sobic005G019700 Sobic005G019700 Sobic001G502900--Sobic005G019700 Sobic004G345500 Sobic004G345500 Sobic001G502900--Sobic004G345500
Octagon: transcription factors


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