Gene annotation
Transcriptome id Sobic.001G502900.1
Synonym Sb01g046980
Functional annotation nicotiana lesion-inducing like, putative, expressed
UniProt C5WXW8
Pfam PF05514
Panther DB PTHR31474
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14420 : HR-like lesion-inducing protein-related
RAP-DB (Rice) LOC_Os03g05520.1 : nicotiana lesion-inducing like, putative, expressed
MaizeGDB (Corn) Zm00025a000664 , Zm00025a053424
Brachypodium -
Barley -
Wheat TraesCS2B02G040200 , TraesCS2A02G026900 , TraesCS2D02G029000 , TraesCS4B02G316300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
2 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
3 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
4 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
5 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
6 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
7 Sobic.003G125650 - K02183: calmodulin
8 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
9 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
11 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
12 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
13 Sobic.001G130301 - K02971: RP-S21e, small subunit ribosomal protein S21e
14 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
15 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
16 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
17 Sobic.009G054800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
18 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
19 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
20 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e


Gene co-expression network
sample Sobic001G502900 Sobic001G502900 Sobic001G475500 Sobic001G475500 Sobic001G502900--Sobic001G475500 Sobic003G160700 Sobic003G160700 Sobic001G502900--Sobic003G160700 Sobic005G113300 Sobic005G113300 Sobic001G502900--Sobic005G113300 Sobic003G078200 Sobic003G078200 Sobic001G502900--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic001G502900--Sobic001G018900 Sobic004G220000 Sobic004G220000 Sobic001G502900--Sobic004G220000 Sobic003G125650 Sobic003G125650 Sobic001G502900--Sobic003G125650 Sobic005G019700 Sobic005G019700 Sobic001G502900--Sobic005G019700 Sobic004G345500 Sobic004G345500 Sobic001G502900--Sobic004G345500 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic001G475500--Sobic005G113300 Sobic007G150800 Sobic007G150800 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G160700--Sobic003G125650 Sobic003G160700--Sobic003G078200 Sobic003G160700--Sobic001G475500 Sobic003G160700--Sobic001G502900 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic005G113300--Sobic004G220000 Sobic001G295200 Sobic001G295200 Sobic005G113300--Sobic001G295200 Sobic005G113300--Sobic001G361600 Sobic006G116700 Sobic006G116700 Sobic005G113300--Sobic006G116700 Sobic005G113300--Sobic001G018900 Sobic007G197800 Sobic007G197800 Sobic005G113300--Sobic007G197800 Sobic009G076400 Sobic009G076400 Sobic005G113300--Sobic009G076400 Sobic002G379500 Sobic002G379500 Sobic005G113300--Sobic002G379500 Sobic005G113300--Sobic003G160700 Sobic002G372400 Sobic002G372400 Sobic003G078200--Sobic002G372400 Sobic009G054800 Sobic009G054800 Sobic003G078200--Sobic009G054800 Sobic010G206200 Sobic010G206200 Sobic003G078200--Sobic010G206200 Sobic003G078200--Sobic005G019700 Sobic003G078200--Sobic007G197800 Sobic007G018300 Sobic007G018300 Sobic003G078200--Sobic007G018300 Sobic009G050300 Sobic009G050300 Sobic003G078200--Sobic009G050300 Sobic003G078200--Sobic001G018900 Sobic003G078200--Sobic006G116700 Sobic001G018900--Sobic006G116700 Sobic009G215200 Sobic009G215200 Sobic001G018900--Sobic009G215200 Sobic001G018900--Sobic009G050300 Sobic001G036900 Sobic001G036900 Sobic001G018900--Sobic001G036900 Sobic001G018900--Sobic007G197800 Sobic002G375100 Sobic002G375100 Sobic001G018900--Sobic002G375100 Sobic001G130301 Sobic001G130301 Sobic001G018900--Sobic001G130301 Sobic001G016400 Sobic001G016400 Sobic001G018900--Sobic001G016400 Sobic003G408100 Sobic003G408100 Sobic001G018900--Sobic003G408100 Sobic004G220000--Sobic005G113300 Sobic004G211833 Sobic004G211833 Sobic004G220000--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic004G220000--Sobic010G012500 Sobic002G398901 Sobic002G398901 Sobic004G220000--Sobic002G398901 Sobic004G220000--Sobic001G295200 Sobic006G083500 Sobic006G083500 Sobic004G220000--Sobic006G083500 Sobic004G220000--Sobic009G188000 Sobic004G220000--Sobic001G361600 Sobic004G220000--Sobic001G130301 Sobic003G125650--Sobic007G197800 Sobic003G125650--Sobic001G130301 Sobic003G125650--Sobic001G018900 Sobic001G402050 Sobic001G402050 Sobic003G125650--Sobic001G402050 Sobic001G390300 Sobic001G390300 Sobic003G125650--Sobic001G390300 Sobic003G125650--Sobic006G116700 Sobic001G493001 Sobic001G493001 Sobic003G125650--Sobic001G493001 Sobic002G200600 Sobic002G200600 Sobic003G125650--Sobic002G200600 Sobic003G125650--Sobic009G050300 Sobic010G230700 Sobic010G230700 Sobic005G019700--Sobic010G230700 Sobic005G019700--Sobic009G050300 Sobic005G019700--Sobic007G018300 Sobic005G019700--Sobic009G054800 Sobic005G019700--Sobic006G116700 Sobic001G091801 Sobic001G091801 Sobic005G019700--Sobic001G091801 Sobic005G019700--Sobic007G197800 Sobic005G019700--Sobic003G078200 Sobic005G019700--Sobic010G206200 Sobic004G345500--Sobic003G160700 Sobic004G345500--Sobic001G502900 Sobic004G345500--Sobic005G113300 Sobic004G345500--Sobic001G475500 Sobic001G031700 Sobic001G031700 Sobic004G345500--Sobic001G031700 Sobic004G345500--Sobic003G125650 Sobic004G345500--Sobic001G295200 Sobic010G221300 Sobic010G221300 Sobic004G345500--Sobic010G221300 Sobic004G345500--Sobic007G197800
Octagon: transcription factors


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